Ehrli_canis_0234 - Ehrlichia canis pre-tmRNA (precursor permuted)

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Ehrlichia canis pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GUGUUUUAAGCACUAUGGCAAUAAAGGCAUCUUAAAAUAGAUGUAUUGGA
CCCGAGGGCAGUGCUCGGCAUCUCCACuuauuacuauGGGGGUGAAACAG
GAUCGACAUGCAUAGUAAAGGGGAUAGUUUUUGCCCGGUGAGAAAGCAGC
CGUUUAAAUGCUCAAAAUUUAUAAGUGCAAACGAUAAUUUCGUUUUUGCA
AAUGACAAUAAUAGCAGUGUUGCUGGCUUAGUGGCUGCUUAGUUUUGUCA
UUAGCGCGGUUUUUUAGAGGGUUUCCCGGGCAACAGAAAAAUCCUCUUUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-76; Coding piece, nt 88-300;
Internal Spacer, nt 77-87
Mature tmRNA acceptor piece has 3-prime CCA tail;

Proteolysis Tag: (A)ANDNFVFANDNNSSVAGLVAA*
Reading Frame (underlined): nt 177-242

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae

Sequencing:
Ehrlichia canis str. Jake, nt 489297-488998 of CP000107.1 (and nt 489297-488998 of NC_007354.1) [Ref 1]

Identification: [Ref 2] in sequence data at DOE Joint Genome Institute

Reference:
1. Copeland et al (2005) Unpublished
2. K Williams (20-Dec-2003)

Posted: 28-Dec-2003

tmRNA Website ID: Ehrli_canis_0234

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