Deinc_geoth_0119 - Deinococcus geothermalis tmRNA

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Deinococcus geothermalis tmRNA:


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GGGGGUGACCCGGUUUCGACAGGGGAACUGAAGGUGAUGCUGCGUGUCGA
GGUGCCGUUGGCCUCGUGAACAAACGGCAAAGCCAUUAACUGGCAACCAG
AACUACGCUCUCGCUGCUUAAGUGAGACAGUGACCGCCGAGCCCGGCCUU
UGGCGCGGCGCGAACUGAACCAAAAGAAGGCUAGCCCCGGCGAGGUUCCA
UAGCCGCAGGCGAAACUCCAUGGAAAUACGGUCUGGGCGAGCCUGCCCGC
UGGCGCUCCCCGACCCGACAACAAAAAAGCGGGCUACACACGUAGACGCA
CGCUGGAAGGACUCUUGGACGGCGGUUCGACUCCGCCCACCUCCACCA

Proteolysis Tag: (A)GNQNYALAA*
Reading Frame (underlined): nt 92-121

Taxonomy: Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae

Sequencing:
Deinococcus geothermalis DSM 11300, nt 167513-167860 of AAHE01000001.1 (and nt 167513-167860 of NZ_AAHE01000001.1) [Ref 1];
uncultured bacterium {zebrafish1 contaminating Danio rerio inner ear EST library}, nt 231-136 of AL724155.1 {downstream sequence nt 135-7 continues to match D. geothermalis genome} [Ref 2]

Identification: [Ref 3] in sequence data at DOE Joint Genome Institute

Reference:
1. Copeland et al (2005) Unpublished
2. Coimbra et al (2002) Unpublished
3. K Williams (22-Dec-2004)

Posted: 27-Dec-2004

tmRNA Website ID: Deinc_geoth_0119

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