Decmo_aroma_0271 - Dechloromonas aromatica pre-tmRNA (precursor permuted)

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Dechloromonas aromatica pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
AUGGUUGUAAUUCCGGCAAUCUGGAGGCGUUCUGGACAGGGGUUCGAUUC
CCCUCACCUCCACCcaagggcauuccgcugaguguuuuuggauGGGGGUG
UACUGGUCUCGACAGGGCGGACAAAGGUGCGCAGGCAACUCGUCAGGCGA
UCGACGUUAAUGAAGCAAAUCCAUAAUUGCCAAUGAUGAGCAAUUCGCUA
UUGCCGCCUAAAAACGGUUAGCCGGGGCUGCUAGAGCCUUGUUACCAAAG
AUAGCCGGCGGGGACUUCGGUCCCCGUCGUCA

Two-Piece Mature tmRNA: Acceptor piece, nt 1-62; Coding piece, nt 94-282;
Internal Spacer, nt 63-93
Mature tmRNA acceptor piece has 3-prime CCA tail;

Proteolysis Tag: (A)ANDEQFAIAA*
Reading Frame (underlined): nt 179-211

Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae

Sequencing:
Dechloromonas aromatica RCB, nt 4390206-4389925 of CP000089.1 (and nt 4390206-4389925 of NC_007298.1) [Ref 1]

Identification: [Ref 2]

Reference:
1. Copeland et al (2005) Unpublished
2. Sharkady and Williams (2004) Nucleic Acids Res 32:4531-8

Posted: 27-Dec-2004

tmRNA Website ID: Decmo_aroma_0271

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