Burkh_malle_0288 - Burkholderia mallei tmRNA

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Burkholderia mallei tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGGCGACCUGGUUUCGACAGGGGUUGUGAAGCGGCUAGGGCAUGUCGA
GGACCCGUCACCUCGUUAAUCAAUGGGAAAAACGUAACUGCAAACGACGA
UACGUUCGCACUGGCAGCCUAAGGGCCGCCGUCCUCUGCCUAGUUCACUG
ACGGGCUAGUGUCGCAAGACCGGUAGCAAUACCGACAGAGGUCAUAUACG
UCAGUUAAGCCUGUCCGGCGUCACGACGGACAGGUCGAAAAUCAAGUGAA
UCGCCGUAACGGAGCGUGUUCGUCCGCGACGUCACGGUUAAAUCAAAUGA
CAGAACUAAACAUGUAGAACUGGUCGUGGACCGCUUCUGGACGCGGGUUC
GAUUCCCGCCGCCUCCACCA

{NOTE: Identical to Burkholderia pseudomallei tmRNA}

Proteolysis Tag: (A)ANDDTFALAA*
Reading Frame (underlined): nt 90-122

Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae

Sequencing:
Burkholderia mallei ATCC 23344, nt 464712-465081 of CP000010.1 (and nt 464712-465081 of NC_006348.1) [Ref 1];
Burkholderia mallei SAVP1, nt 595803-595434 of AAHQ02000001.1 (and nt 595803-595434 of NZ_AAHQ02000001.1) [Ref 2];
Burkholderia mallei NCTC 10247, nt 45996-45627 of AAHP01000036.1 (and nt 45996-45627 of NZ_AAHP01000036.1) [Ref 2];
Burkholderia mallei GB8 horse 4, nt 86652-87021 of AAHO01000009.1 (and nt 86652-87021 of NZ_AAHO01000009.1) [Ref 2];
Burkholderia mallei 10399, nt 69557-69188 of AAHN01000009.1 (and nt 69557-69188 of NZ_AAHN01000009.1) [Ref 2];
Burkholderia mallei 10229, nt 978037-978406 of AAHM02000001.1 (and nt 978037-978406 of NZ_AAHM02000001.1) [Ref 2];
Burkholderia mallei JHU, nt 55510-55879 of AAIR02000009.1 (and nt 55510-55879 of NZ_AAIR02000009.1) [Ref 2];
Burkholderia mallei FMH, nt 86667-87036 of AAIQ02000010.1 (and nt 86667-87036 of NZ_AAIQ02000010.1) [Ref 2]

Identification: [Ref 3] in sequence data at TIGR

Reference:
1. Nierman et al (2004) PNAS 101:14246-51
2. Nierman (2005) Unpublished
3. K Williams (21-Mar-2001)

Posted: 22-Mar-2001 Updated: 5-Nov-2005

tmRNA Website ID: Burkh_malle_0288

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