Buchn_aphi3_0363 - Buchnera aphidicola pre-tmRNA, version 3 {Bp}

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Buchnera aphidicola pre-tmRNA, version 3 {Bp}:


    .   10    .   20    .   30    .   40    .   50
GGGGCUGAUAUUGGAUUUGACAAAAUUAUUGAAAACUGAUGUGCAUGCCG
AGGAUGGUUUGCCUCGUUAAAAAACCAUAAAAAAUAGUAGCAAAACAAAA
UCAAUACGCUUUAGCAGCUUAAUAAUCUGAAUAAAGCCCUUCUUUUAAAC
AUAUUCUCUUAAUGUUUAAUUUAUAUAGAAGGUUAAUCUAAAGAGAUCGC
AACUCAAAUCUAUUUUGAAAGAUUUUUUGUUGCUAAAUAAAAACUUCAAA
AUAUAUAUCUAUAAUGAGUCUAUACAUCGAUAGAUAAGAAAAGAUAAUAG
ACUAAGCAUGUAGUAUCUGAAGUCGUAAAAAUUUUGGACGCGGGUUCGAA
UCCCGCCAGCUCCAaaa

Mature tmRNA has 3-prime CCA tail;

Proteolysis Tag: (A)AKQNQYALAA**
Reading Frame (underlined): nt 90-122

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae

Sequencing:
Buchnera aphidicola str. Bp (Baizongia pistaciae) {host: Baizongia pistaciae (aphid)}, nt 200304-199938 of AE016826.1 (and nt 200304-199938 of NC_004545.1) [Ref 1]

Identification: [Ref 1]

Reference:
1. Van Ham et al (2002) PNAS 100:581-6

Posted: 28-Jan-2003

tmRNA Website ID: Buchn_aphi3_0363

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