Buchn_aphi2_0362 - Buchnera aphidicola pre-tmRNA, version 2 {Sg}

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Buchnera aphidicola pre-tmRNA, version 2 {Sg}:


    .   10    .   20    .   30    .   40    .   50
GGGGCUGUUUUUGGAUUCGACAAAGUUAUCAAAAAAGUAAAGUGCAUGCC
GAGGAACGGUUUGCCUCGAUAAAAAACCGUAAAAAAAUAGCUGCAAAUAA
UAAACAAAACUACGCUUUAGCAGCUUAAAAAACUGUAUAAAGCCCUUUCA
UCUCUGACUUCUCUCUUGAGAACGAGAAAUUUUUAAGAAAGGCCGACAUU
UAAAGAGAAAAAUGUGAGCACUAUGCUUGAUAGUGACACAAAAUUAAUUU
UUCAAGCUAUAAGCUUAAAAUGAGUUUUUCCAAAUUAAGCAAUGAAAAAA
UAAAGAAAAACUAAGCAUGUAGUAUCUUUAUUUAUAGAAAUUUUGGACGC
GGGUUCAAAUCCCGCCAGCUCCAaaa

Mature tmRNA has 3-prime CCA tail;

Proteolysis Tag: (A)ANNKQNYALAA*
Reading Frame (underlined): nt 93-128

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae

Sequencing:
Buchnera aphidicola str. Sg (Schizaphis graminum) {host: Schizaphis graminum (greenbug)}, nt 203736-203361 of AE013218.1 (and nt 203736-203361 of NC_004061.1) [Ref 1]

Identification: [Ref 1]

Reference:
1. Tamas et al (2002) Science 296:2376-9

Posted: 3-Jul-2002

tmRNA Website ID: Buchn_aphi2_0362

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