Barto_quint_0220 - Bartonella quintana pre-tmRNA (precursor permuted)

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Bartonella quintana pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GCUGGCUUACCAGCUAUGGUAAUAAAUGGACAAUGAAAUAAACUCAUUGG
ACCCGGGGGCGGUACCCGGCGCCUCCACCAaaauauaacaaaaauuauau
uuugguGGGGGCGAAAUAGGAUCGACAAGGGUGUAAAGAUUGCUCUUUUA
CUCGGCAUAGUACCACCGUCAUCGGACUAAAUGAGUAGUUGCAAAUGACA
ACUAUGCGGAAGCACGUCUCGCUGCUUAAUGUAGUGUGAAUGUUUCAAAC
UAAGCCUUAAAUCGUCGCAGAUUUAAGCGGGGUUCGAAGGCACCUGGCAA
CAGAAGCCUUCACUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-77; Coding piece, nt 107-315;
Internal Spacer, nt 78-106

Proteolysis Tag: (A)ANDNYAEARLAA*
Reading Frame (underlined): nt 191-229

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae

Sequencing:
Bartonella quintana str. Toulouse, nt 1020861-1021175 of BX897700.1 (and nt 1020861-1021175 of NC_005955.1) [Ref 1]

Identification: [Ref 2] in NC_005955

Reference:
1. Alsmark et al (2004) PNAS 101:9716-21
2. K Williams (22-Dec-2004)

Posted: 27-Dec-2004

tmRNA Website ID: Barto_quint_0220

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