Barto_hense_0219 - Bartonella henselae pre-tmRNA (precursor permuted)

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Bartonella henselae pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GCUGGCUUGCCAGCUAUGGUAAUAAAUGGACAAUGAAAUAAGCUUAUUGG
ACCCGGGGGCGGUACCCGGCGCCUCCACCAaaauauaauuuguuuuuuua
uauuuuaguGGGGGCGAAACAGGAUCGACAAAAGUGUAAAGAUUGCUCUU
UUACUCGGUAUAGUACCACCGUUAUCGGACUAAAUGAGUAGUUGCAAAUG
ACAACUAUGCGGAAGCACGUCUCGCUGCCUGAGGUGGUGUGAAUGCUUCA
AACUAAGUCUUAAACCGUCGCAGGUUUAAGCGGGGUUCGAAGGCACCUGG
CAACAGAAGCCUUCACUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-77; Coding piece, nt 110-318;
Internal Spacer, nt 78-109

Proteolysis Tag: (A)ANDNYAEARLAA*
Reading Frame (underlined): nt 194-232

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae

Sequencing:
Bartonella henselae str. Houston-1, nt 1215960-1216277 of BX897699.1 (and nt 1215960-1216277 of NC_005956.1) [Ref 1]

Identification: [Ref 2]

Reference:
1. Alsmark et al (2004) PNAS 101:9716-21
2. K Williams and S Andersson (of genome project) (12-Mar-2000)

Posted: 27-Dec-2004

tmRNA Website ID: Barto_hense_0219

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