Bacro_theta_0125 - Bacteroides thetaiotaomicron pre-tmRNA

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Bacteroides thetaiotaomicron pre-tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGUUGACUGGAUUUGACAGCGGGCAGAAAUGGUAGGUAAGCAUGCAGU
GGGUCGGUAAUUUCCACUUAAAUCUCAGUUAUCAAAACUUUAUCUGGCGA
AACUAAUUACGCUCUUGCUGCUUAAUCGAAUCACAGUAGAUUAGCUUAAU
CCAGGCACUAGGUGCCAGGACGAGACAUCACUCGGAAGCUGUUGCUCCGA
AGCAUUCCGGUUCAGUGGUGCAGUAACAUCGGGGAUAGUCAGAAGCGGCC
UCGCGUUUUUGAUGAAACUUUAGAGGAUAAGGCAGGAAUUGAUGGCUUUG
GUUCUGCUCCUGCACGAAAAUUUAGGCAAAGAUAAGCAUGUAGAAAGCUU
AUGAUUUCCUCGUUUGGACGAGGGUUCGAUUCCCUCCAGCUCCACCu

Mature tmRNA has 3-prime CCA tail;

Proteolysis Tag: (A)GETNYALAA*
Reading Frame (underlined): nt 96-125

Taxonomy: Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidetes (class); Bacteroidales; Bacteroidaceae

Sequencing:
Bacteroides thetaiotaomicron VPI-5482, nt 5798212-5798608 of AE015928.1 (and nt 5798212-5798608 of NC_004663.1) [Ref 1]

Identification: [Ref 2] in NC_004663

Reference:
1. Xu et al (2003) Science 299:2074-6
2. K Williams (15-Aug-2003)

Posted: 18-Aug-2003

tmRNA Website ID: Bacro_theta_0125

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