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Azospira oryzae pre-tmRNA (ends unsequenced) (precursor permuted): 

    .   10    .   20    .   30    .   40    .   50
NNNNNNNNNNNNNNNNNNNNNNGGAGGCGUUCUGGACGCGGGUUCGAUUC
CCGCCACCUCCACCuaagaguuucggagaguucuuagguGGGGGUGUACU
GGCUUCGACAGGGCGGGCAAAGGUGCGCAGGCAACUCGUCAGGCGAUCGA
CGUUAAUGAAGCAAAUCUCCAAACGCCAACGAUGAGCGUUUCGCAAUCGC
CGCUUAAGGCUUUUGCCGAGGCUGCUUGAGCCUUGUUACCAAAGAAAAGC
CGGUNNNNNNNNNNNNNNNNNNNNNNN
Two-Piece Mature tmRNA: Acceptor piece (partial), nt 1-40; Coding piece (partial), nt 68-232;
Internal Spacer, nt 41-67
Mature tmRNA acceptor piece has 3-prime CCA tail;
Proteolysis Tag: (A)ANDERFAIAA*
Reading Frame (underlined): nt 175-207
Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae
Sequencing:
Azospira oryzae {strain PS}, nt 1-232 of AY911532.1 [Ref 1]
Identification: [Ref 1]
Reference:
1. Sharkady and Williams (2004) Nucleic Acids Res 32:4531-8
Posted: 27-Dec-2004
tmRNA Website ID: Azosp_oryza_0273
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