Anaba_varia_0145 - Anabaena variabilis pre-tmRNA

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Anabaena variabilis pre-tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGUCCGUAACGGUUUCGACAGGUUGGCGAACGCUACUCUGUGAUUCAGG
UCGAGAGUGAGUCUCCUCUCGCAAAUCAAGGCUCAAAACAAAAGUAAAUG
CGAAUAACAUCGUAAAAUUUGCUCGUAAGGACGCUCUAGUAGCUGCCUAA
UUAGCCUCUUACAGGUUCGAGCGUCUUCGGUUUGACUCCGUUAAGGACUG
AAGACCAACCCCCAACGGAUGCUCUAGCAAGUGUUCUCUGGUUGGCUUGC
UAGCUAAGAUUUAAUCAGAGCAUCCUACGUUCGGGAUAAUGAACGAUUCC
CGCCUUGAGGGUCAGAAAGGCUAAACCUGUGAAUGAGCGGGGGGUCAAUA
CCCAAUUUGGACAGCAGUUCGACUCUGCUCGGAUCCACua

Mature tmRNA has 3-prime CCA tail;

Proteolysis Tag: (A)ANNIVKFARKDALVAA*
Reading Frame (underlined): nt 100-150

Taxonomy: Bacteria; Cyanobacteria; Nostocales; Nostocaceae

Sequencing:
Anabaena variabilis ATCC 29413, nt 3231376-3230987 of CP000117.1 (and nt 3231376-3230987 of NC_007413.1) [Ref 1]

Identification: [Ref 2] in sequence data at DOE Joint Genome Institute

Reference:
1. Copeland et al (2005) Unpublished
2. K Williams (20-Dec-2003)

Posted: 28-Dec-2003

tmRNA Website ID: Anaba_varia_0145

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