Alprot_SAR1_0620 - Alphaproteobacteria SAR-1 pre-tmRNA (precursor permuted)

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Alphaproteobacteria SAR-1 pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GCUGGGGAUAUCCCAGCUAUAGGGAUAAACGGCUUGCGUAAUACCCAUUA
CGGACCCGGGGGCGGUACCCGGCACCUCCACCAuaaauuaGGGGGUGAUA
UAGGAUCGACGAAUGCUUAAAGGUAAGUUUUUCUCUCGGUAUUGUACCAC
CGUUAUCGGGCUAUUUUAUAAAUGCUAACGAUGAAUUAGCGCUCGCUGCU
UAAUCUAAUUAGGUAAGCGCGGUUCGGGAGACACCGGGCAACAGAAGUCU
CCCACUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-80; Coding piece, nt 91-257;
Internal Spacer, nt 81-90

Proteolysis Tag: (A)ANDELALAA*
Reading Frame (underlined): nt 174-203

Taxonomy: {Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales}

Sequencing:
environmental sequence {cf. Alphaproteobacteria SAR-1}, nt 1166-1422 of AACY01003734.1 [Ref 1];
environmental sequence, nt 6717-6939 of AACY01024752.1 [Ref 1]

Identification: [Ref 2] in AACY01003734

Reference:
1. Venter et al (2004) Science 304:66-74
2. K Williams (10-Feb-2005)

Posted: 10-Feb-2005

tmRNA Website ID: Alprot_SAR1_0620

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