Gamma-Proteobacterial tmRNA Alignment 15-Feb-2006 by Kelly Williams for The tmRNA Website, with base-pairing color-coded as in home page diagram. Underline marks the predicted reading frame for the proteolysis-inducing peptide tag. Lowercase marks segments not homologous to tmRNA, intervening segments that are absent in the mature tmRNA, and portions of the expected 3-prime CCA tail that are not encoded in the genome. Acidithiobacillales Acthi_ferr1 GGGGGCG------ACCGGC--UUCGACGCAGGUCGC------GAAGCCUUCGGUGCAUGC--AGAGC--UGCGGUUC--GCUCUUAAAACU---------GGUCGCA---GAUUCAUAAUUGCCAACGACAGCAAU---------------------------------------------------------UACGCUCUCGCUGCUUAA----------------------------GCAGUGAG------------------------CCCUCUGCCCGGAUUU-----------------GUCUGUGGAUCCGGAGCCGAAAGGCGCGCGGAGGG--------------------------------------------UCAUGAAACACGGAAUC--GUGCGCAUUCUA--------------GUCUGUGGGAUGCGCGC---UAAAUUAAAG-CAGAAUC------GCCAUGUCGUCAUCCU-GUCUGUC-GGAGGGCGGUGCGGU----UAAAGCCAAAA--GACAA-ACUACGCA-UGUAG----------------------AUCCGGUGGUCU------AGGUACUGCGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Acthi_ferr1 Acthi_ferr2 GGGGGCG------ACCGGC--UUCGACGCAGGUCGC------GAAGCCUUCGGUGCAUGC--AGAGC--UGCGGUUC--GCUCUUAAAACU---------GGUCGCA---GAUUCAUAAUUGCCAACGACAGCAAU---------------------------------------------------------UACGCCCUCGCUGCUUAA----------------------------GCAGUGAG------------------------CCCUCUGCCCGGAUUU-----------------GUCUGUGGAUCCGGAGCCGAAAGGCGCGCGGAGGG--------------------------------------------UCAUGAAACACGGAAUC--GUGCGCAUUCUA--------------GUCUGUGGGAUGCGUGC---UAAAUUAAAG-CAGAAUC------GCCAUGUCGUCAUCCU-GUCUGUC-GGAGGGCGGUGCGGU----UAAAGCCAAAA--GACAA-ACUACGCA-UGUAG----------------------AUCCGGUGGUCU------AGGUACUGCGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Acthi_ferr2 Xanthomonadales Xylel_fast1 GGGGGUG-----CACUGGC--UUCGACGGGGGUCAC-----AAAAUCACUUGGUGCAUGC--CGAGG-GGGCCGCUUU-CCUCGUAAAUCC---------AGCAGC---AAACUUAUAGUUGCCAACGAAGACAAC---------------------------------------------------------UUCGCUGUAGCCGCUUAA--------------------------GGCUUAAGC-------------------------CUCGAAACUGCUUGUG------------------UCCGUGCUCGCAG-CGUAGAG----------------------------------------------------------UCAUCAUCACGGAACC--GCUGAGACGUGGCC-----------GUCUGCCCAUCCUCGGU---UAAAUCUA--GCAGAC-UG------GUUUCCGGGUGCGCUUUGCCUGUCGU-GCUGCCCGGCGAC----GAGACCUA---ACGGCGAGGAUAAGCA-UGUAG----------------------GGCCGGGGAUGG------AGUACUUUCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xylel_fast1 Xylel_fast2 GGGGGUG-----CACUGGC--UUCGACGGGGGUCAC-----AAAAUCACUUGGUGCAUGC--CGAGG-GGGCCGCUUU-CCUCGUAAAUCC---------AGCAGC---ACACUUAUAGUUGCCAACGAAGACAAC---------------------------------------------------------UUCGCUCUAGCCGCUUAA--------------------------GGCUUAAGC-------------------------CUCGAAACUGCUUGUG------------------UCCGUGCUCGCAG-CGUAGAG----------------------------------------------------------UCAUCAUCACGGAACC--GCUGAGACGUGGCU-----------GUCUGCCCACACUUGGU---UAAAUCUA--GCAGAC-UG------GUUUCCGGGUGCGCUUUGCCUGUCGU-GCUGCCCGGCGAC----GAGACCUA---ACGGCCAGGAUAAGCA-UGUAG----------------------GGCCGGGGAUGG------AGUACUUUCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xylel_fast2 Xylel_fast3 GGGGGUG-----CACUGGC--UUCGACGGGGGUCAC-----AAAAUCACUUGGUGCAUGC--CGAGG-GGGCCGCUUU-CCUCGUAAAUCC---------AGCAGC---ACACUUAUAGUUGCCAACGAAGACAAC---------------------------------------------------------UUCGCUAUAGCCGCUUAA--------------------------GGCUUAAGC-------------------------CUCGAAACUGCUUGUG------------------UCCGUGCUCGCAG-CGUAGAG----------------------------------------------------------UCAUCAUCACGGAACC--GCUGAGACGUGGCC-----------GUCUGCCCACCCUUGGU---UAAAUCUA--GCAGAC-UG------GUUUCUGGGUGCGCUUUGCCUGUCGU-GCUGCCCGGCGAC----GAGACCUA---ACGGCCAGGAUAAGCA-UGUAG----------------------GGCCGGGGAUGG------AGUACUUUCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xylel_fast3 Xylel_fast4 GGGGGUG-----CACUGGC--UUCGACGGGGGUCAC-----AAAAUCACUUGGUGCAUGC--CGAGG-GGGCCGCUUU-CCUCGUAAAUCC---------AGCAGC---ACACUUAUAGUUGCCAACGAAGACAAC---------------------------------------------------------UUCGCUCUAGCCGCUUAA--------------------------GGCUUAAGC-------------------------CUCGAAACUGCUUGUG------------------UCCGUGCUCGCAG-CGUAGAG----------------------------------------------------------UCAUCAUCACGGAACC--GCUGAGACGUGGCC-----------GUCUGCCCACCCUUGGU---UAAAUCUA--GCAGAC-UG------GUUUCCGGGUGCGCUUUGCCUGUCGU-GCUGCCCGGCGAC----GAGACCUA---ACGGCCAGGAUAAGCA-UGUAG----------------------GGCCGGGGACGG------AGUACUUUCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xylel_fast4 Xanmo_camp1 GGGGGUG-----CACUGGU--UUCGACGGGGGUCGC-----GAAGUCGCUUGGCGCAUGC--CGAGG-GGGCAGCUUU-CCUCGUUAAUCC---------AGCAGC---AAACUUUUAGUUGCCAACGACGACAAC---------------------------------------------UACGGUUCGGACUUCGCUAUCGCCGCUUAA--------------------UUGGCUUUAGUUGUAGUUCUACAGCCGCCUAAGGCGAACCCCCGAAACUACUUGUG------------------CCCGUGCUCGUAGAUGUAGGG----------------------------------------------------------UCAUUAUCACGGAACC--GCCGGUA-GUGGCU-----------GCCUGUCAGCUAUCGGU---UAGAUCAA--GCAGGC-UG------GUUUUCAGGUGCGCUUUGCCCGCCGU-GCUGCCUGGGAAC----GAGAUCUA---ACGGA-GGGAUAAGCA-UGUAG----------------------UGCUGGGGAUGG------AGUGCUUCCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xanmo_camp1 Xanmo_camp2 GGGGGUG-----CACUGGU--UUCGACGGGGGUCGC-----GAAGUCGCUUGGCGCAUGC--CGAGG-GGGCAGCUUU-CCUCGUUAAUCC---------AGCAGC---AAACUUUUAGUUGCCAACGAUGACAAC---------------------------------------------UACGGUUCGGACUCCGCUAUCGCCGCUUAA--------------------UUGGCUUUAGUUGUAGUUCUACAGCCGCCUAAGGCGAACCCCCGAACCUACUUGUG------------------CCCGUGCUCGUAGGUGUAGGG----------------------------------------------------------UCAUUAUCACGGAACC--AUCGGUA-GUGGCU-----------GCCUGUCAGCUACCGGU---CAGAUAAA--GCAGGC-UG------GUUUCCAGGUGCGCUUUGCCAACCGU-GCUGCCUGGAAAC----GAGAUCUA---ACGGA-GGGCUAAGCA-UGUAG----------------------UGCUGGGGAUGG------AGUGCUUCCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xanmo_camp2 Xanmo_axono GGGGGUG-----CACUGGU--UUCGACGGGGGUCGC-----GAAGUCGCUUGGCGCAUGC--CGAGG-GGGCAGCUUU-CCUCGUUAAUCC---------AGCAGC---AAACUUUUAGUUGCCAACGAUGACAAC---------------------------------------------UACGGUUCGGACUUCGCUAUCGCCGCUUAA--------------------UUGGCUUUAGUUGUAGUUCUACAGCCGCCUAAGGCGAACCCCCGAACCUACUUGUG------------------CCCGUGCUCGUAGGUGUAGGG----------------------------------------------------------UCAUUAUCACGGAACC--AUCGGUA-GUGGCU-----------GCCUGUCAGCUACCGGU---CAGAUAAA--GCAGGC-UG------GUUUCCAGGUGCGCUUUGCCAACCGU-GCUGCCUGGGAAC----GAGAUCUA---ACGGA-GGGCUAAGCA-UGUAG----------------------UGCUGGGGAUGG------AGUGCUUCCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xanmo_axono Xanmo_oryza GGGGGUG-----CACUGGU--UUCGACGGGGGUCGC-----GAAGUCGCUUGGCGCAUGC--CGAGG-GGGCAGCUUU-CCUCGUUAAUCC---------AGCAGC---AAACUUUUAGUUGCCAACGAUGACAAC---------------------------------------------UACGGUUCGGACUUCGCUAUCGCCGCUUAA--------------------UUGGCUUUAGUUGUCGUUCUACAGCCGCCUAAGGCGAACCCCCGAACCUACUUGUG------------------CCCGUGCUCGUAGGUGUAGGG----------------------------------------------------------UCAUUAUCACGGAACC--AUCGGUA-GUGGCU-----------GCCUGUCAGCUACCGGU---UAGAUAAA--GCAGGC-UG------GUUUUCAGGUGCGCUUUGCCAACCGU-GCUGCCUGGGAAU----GAGAUCUA---ACGGA-GGGCUAAGCA-UGUAG----------------------UGCUGGGGAUGG------AGUGCUUCCGGAC-GGCGGUUCGAUUCCGCC-CACCUCCACCA Xanmo_oryza Uncul_rice4 GGGGGUG-----CAUUGGU--UUCGACGGGGGUUGU-----GAAGUCGCCUGGCGCAUGC--CGAGG-GGGUAGCUUU-CCUCGUAAAUCC---------AGCUGC---AAAACUCUAGUUGCCAACGACGACAAC---------------------------------------------------------UACGCUCUGGCCGCUUAA--------------------------GGCCUAAGC-------------------------CUCGAAACCGCUUGUG------------------UCCAUGCUCGCGG-UGUAGAG----------------------------------------------------------UCACUAUCAUGGAAUC--GCGCUGG-ACGGCU-----------GCCUGUCAGUCCGGCAC---UAGAACACA-ACAGGC-UG------GUUCCCGGAUGCGCUUCGCGCACCGU-GCUGUUCGGGGAC----GAGAUCCA---ACGGU-GAGCUAAGCA-UGUAG----------------------UGCUGGGGAUGG------AGUGCCUUCGGAC-GGCGGUUCAAUUCCGCC-CACCUCCACCA Uncul_rice4 Uncult_U01a NNNNNNN-----NNNNNNN--NNNNNNGCUGGUAAC-----GGAAUCCG-AAGUGCAUGC--CGAGG--UGUCAUGU--CCUCGUAAAACC---------UGUGACA--ACCAAGCUAGUUGCGAACGACUCCAAC---------------------------------------------------------UACGCCCUCGCCGCCUAA-------------------------AUCCCGGUGAG------------------------CGUCCAUCCUUUCAGU-----------------GCCGAUACUGGUUGGAAUGGGCG--------------------------------------------------------UCGACUCUUAUCGGAUC--GUGGUGAAGCCCG-------------CCCUUGGCCGAUCUGC---UAAAACUCUA-AGGGGAUAA-----GCGUUGGAGAUCCGU--GCCUGUC---CGGGAGCCAACGU----CGAAAACCAAA--GAUCAGGCUAAGCA-UGUAG----------------------AUCUGAGGGCUA------CGAUCUGGCGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_U01a Uncult_U01b NNNNNNN-----NNNNNNN--NNNNNNGCUGGUAAC-----GGAAUCCG-AAGUGCAUGC--CGAGG--UGUCAUGU--CCUCGUAAAUCC---------CGUGGCA--ACCAAGCUAGUUGCGAACGACUCCAAC---------------------------------------------------------UACGCCCUCGCCGCCUAA-------------------------AUCCCGGUGAG------------------------CGUCCAUCCUUUCGGU-----------------GCCGAUACCGGUUGGAAUGGGCG--------------------------------------------------------UCGACUCUUAUCGGCUC--GCGGUGAAGCCCG-------------CCCUUGGCCGAUCUGC---UAAAACCCUA-AGGGGAUAA-----GCGUUGGAGAUCCGU--GCCUGUC---CGGGAACCAACGU----CGAAAACCAAA--GAUCAGGCUAAGCA-UGUAG----------------------AUCUGAGGGCUA------CGAUCUGGCGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_U01b Steno_malto GGGGGUG-----CAUUGGU--UUCGACGGGGGUUGU-----GAAGUCGCCUGGCGCAUGC--CGAGG-GGGUAGCUUU-CCUCGUAAAUCC---------AGCUGC---AAAACUCUAGUUGCCAACGACGACAAC---------------------------------------------------------UACGCUCUGGCCGCUUAA--------------------------GGCCUAAGC-------------------------CUCGAAACCGCUUGUG------------------UCCAUGCUCGCGG-UGUAGAG----------------------------------------------------------UCACUAUCAUGGAAUC--GCGCUGG-GUGGCU-----------GCCUGUCAGUCCGGCAC---UAGAACACA-ACAGGC-UG------GUUCCCGGAUGCGCUUUGCACGCCGU-GCUGUUCGGGGAC----GAGAUCCA---ACGGU-GAGCUAAGCA-UGUAG----------------------UGCUGGGGAUGG------AGUGCCUUCGGAC-GGCGGUUCAAUUCCGCC-CACCUCCACCA Steno_malto Cardiobacteriales Diche_nodos GGGGGCG----UUCUUGGA--UUCGACGGGGAUUGCG------AGGCUCGAGGUGCAUGU--CGAGA---AUGAGAGAAUCUCGUUAAAUA---------CUUUCAA---AACUUAUAGUUGCAAACGACGACAAC---------------------------------------------------------UACGCUUUAGCGGCUUAA-------------------------UUCCCGCUU--------------------------UCGCUUACCUAGAUUU-----------------GUCUGUGGGUUUACCGUAAGCGA----------------------------------------------------------CAUUAACACAGAAUC--GCUGGUUAACGCG------------UCCGCUGUUA--AUCGGU--UAAA--UUA-AGCGGAAUC------GCUUGUAAAAUGCCU--GAGCGUU--GGCUGUUUAUGAGU----UAAACCUAAUU--AACUGCUCUAAACA-UGUAG----------------------UACCAAAAGUUA------AGGAUUCGCGGAC-GGGGGUUCAAAUCCCCC-CGCCUCCACCA Diche_nodos Thiotrichales Franc_tula1 GGGGGCG----AAUAUGGU--UUCGACAUGAAUGUC-----AAAAUCU-AAGGUGCAUGC--CGAGG-AAGUACCGUAACCUCGUUAAUA-------ACAGUACAAAUGCCAAUAAUAACUGGCAACAAAAAAGCA---------------------AACCGCGUAGCGGCUAACGACAGCAACUUUGCUGCUGUUGCUAAAGCUGCCUAG--------------------------UCUAGCUUAAUAAUCUAGAUGCGC----------ACGGAUAUGAUAGUCUU----------------UCUUAUGACACUAUCUAUACAUCCGUUCA---------------------------------------------------UAUUCCGCAUAAGA----CGGUCUUUGCUUUUU-----------GUCUGGGAGUUAAGGCUG-UAUUUAA----CAGAC-UC------GCUAACUAUUACCCU--GGCUAAUUGGGGAAUAGUCAAGC----UAAACUCAAAUA-GAUUAGCCUAAGCA-UGUAG----------------------AUCCAAAGAUCU------AGAGUUUGUGGAC-GCGGGUUCAAAUCCCGC-CGCCUCCACCA Franc_tula1 Franc_tula2 GGGGGCG----AAUAUGGU--UUCGACAUGAAUGUC-----AAAAUCU-AAGGUGCAUGC--CGAGG-AAGUACCGUAACCUCGUUAAUA-------ACAGUACAAAUGCCAAUAAUAACUGGCAACAAAAAAGCA---------------------AACCGCGUAGCGGCUAACGACAGCAACUUUGCUGCUGUUGCUAAAGCUGCCUAG--------------------------UCUAGCUUAAUAACCUAGAUGCGC----------ACGGAUAUGAUAGUCUU----------------UCUUAUGACACUAUCUAUACAUCCGUUCA---------------------------------------------------UAUUCCGCAUAAGA----CGGUCUUUGCUUUUU-----------GUCUGGGAGUUAAGGCUG-UAUUUAA----CAGAC-UC------GCUAACUAUUACCCU--GGCUAAUUGGGGAAUAGUCAAGC----UAAACUCAAAUA-GAUUAGCCUAAGCA-UGUAG----------------------AUCCAAAGAUCU------AGAGUUUGUGGAC-GCGGGUUCAAAUCCCGC-CGCCUCCACCA Franc_tula2 Thmic_cruno GGGGAUG-----CACUGGU--UUCGACGGGGAGUAC-----AAAGUUU-AGGAUGCAUGU--CGUGC--CUGAAUGAU-GCACGUAAAUCU-------UUAUUUCA--AUUUGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCGGCUUAA-----------------------UCCCGCUAG----------------------------CGCAGACUGGGACCGUUG--------------UUCGUGGCACCCAGCUCUGUG----------------------------------------------------------UCGACUCACACGGAAUC---GUCGGGUCUUAUGU------------GUUUGGAUAAGACUUGAC-UAAACUUAA--CAAAC-UC------GCUUAAUGUGAUCCCUGCUGGCCGGGCAGCAUUAAGU-------UAAAAUAAUA---GAC-CAAAUAAACA-UGUAG----------------------AGUUUUAAAUGG------AGGCUUCUCGGAC-GGCGGUUCGACUCCGCC-CAUCUCCACCA Thmic_cruno Chromatiales Ntsco_ocean GGGGGCG-----ACCUGGC--UUCGACGCGGGUAGC-----AAAACCU-AAGGGGCAUGC--CGAGG-UGCAGUGA---CCUCGUUAAUCA---------CGCUGCA---ACAUUAUAGUUGCCAACGACGACAAC---------------------------------------------------------UACGCACUCGCUGCUUAA------------------------AACCCAGUAGGGUGC---------------------CGUCUGACUGAAGCCGU----------------GCUUGUGCGUUCAGAUUUCAGGCG-------------------------------------------------------UCGAUUCUCACAAGAUC--GCGGUGAA-GUUC-------------UCCCAGGGCAGACCCGC--UAAAACUUUA-CUGGGAUC------GCCGUAUGUUUUCCU-UGCCCGUC--GGGUAGCAUGCGGU----UAAAUUAAU----GACUGGGCUAUGCA-UGUAG----------------------AACCGAAGGCGG------AGUACUUGUGGAC-GCGGGUUCGAUUCCCGC-CGCCUCCACCA Ntsco_ocean Uncul_whal1 GGGGGCG-----UAUUGGA--UUCGACGCCGGUUAC-----AAAACUU-GAGGUGCAUGC--CGAGAUGGUGACCA--AUCUCGUUAAUCCAA-------AGUCGCA--AACCUUAUAGUUGCCAACGACGACAAC---------------------------------------------------------UACGCACUCGCUGCUUAU------------------------ACACCAGUAGAGCGC---------------------CAUCUGACUGGAGCCGU----------------GCUUAUGCGUCCAGC-----GCUUCAUCUGCCCCCGGGCCUCAAAACCCAGGGCAGCGGCGAAGCAUUCAGGUG-----UCAUAACUCAUAAGAUC--GCGAUGAC-CCAC------------GUCUGGGGGU-GACUCGC--UAAAACCUAAACCAGAAUC------GCCAUUUCACAUGCCCUGCCGGCC--GGGCAGUGAGAGGU----UAAAUAUAAUA--GACCGAACUAAGCA-UGUAG----------------------AGCCGAUAGCAG------CGGACUGACGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Uncul_whal1 Legionellales Legio_pneum GGGGGCG-----ACCUGGC--UUCGACGUGGGUUGC-----AAAACCG-GAAGUGCAUGC--CGAGA-AGGAGAUC---UCUCGUAAA-UA---------AGACUCA-AUUAAAUAUAAAUGCAAACGAUGAAAAC---------------------------------------------UUUGCUGGUGGGGAAGCUAUCGCUGCCUAA---------UAAGCACUUUAGUUAAACCAUCACUGUGUACUGGCCAAUAAACCCAGUAUCCCGUUCGACCGAGCCC-----------------GCUUAUCGGUAUCGAAUCAACGG--------------------------------------------------------UCAUAAGAGAUAAGCUA--GCGUCCUAAUCUA--------------UCCCGGGUUAUGGCGC---GAAACUCA---GGGAAUC------GCUGUGUAUCAUCCU--GCCCGUC--GGAGGAGCCACAGU----UAAAUUCAAAA--GACAAGGCUAUGCA-UGUAG----------------------AGCUAAAGGCAG------AGGACUUGCGGAC-GCGGGUUCGAUUCCCGC-CGCCUCCACCA Legio_pneum Bctr_SAR1_1 NNNNNNN-----NNN-NNN--NNNNNNNNNNNNNNN----NNNNNNNNNNNNNNNNNNNN--NNNN--NNNNNNNN----NNNNNNNNNN----------NNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------------------------------------NNNNNNNNNNNNNNN-----------------------NNNNNNNNNNN--------------------------NNNNNNNNNNNNNNNN-----------------NNNNNNNNNNNNNNNNNNNNCGG---------------------------------------------------------CUAAACACAUAGUCUA--GCCAGGCUGUAUU-------------GCUUGGAUACAGUUUGGU-UAAAUUUAAU-CAAGC-UC------GCAUUCAU---GCCCU-GCUCUUC--GGGUG-AUGGAUGC----UAAAAAUAAUA--GAAUGAGCUAUGCA-UGUAG----------------------AAGUUAGGCUGA------AGGAUUGACGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Bctr_SAR1_1 Bctr_SAR1_2 GGGGGCG-----ACC-GGU--UUCGACAUUUUAGAA----UGAAAUCUUAGAUUGCAUGU--AGAG--CUUAGUAA----CUCUUAAAAC----------UUCUAAA---CUAUAUUAAGUGCCGAUAAUGGCCAA------------------------------------------------------------AUGGCUUUUGCUUAA-----------------------UUGCUAAAGUC--------------------------CAUCAUCAGUAGACGU-----------------UUCUCAUCGUUCGCUGAAUGGUG--------------------------------------------------------UCAUAAAA-AUGAGAUA--GUUUAUUUUUCUG--------------CUUCGGUUUAAUAAAU---GAAUCCUUA--GAAGAUA------GCUAUAUGCCUGUUU--GUUCUGU--ACUGU-CAUAUANN----NNNNNNNNNNN--NNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN------NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNN-NNNNNNNNNNN Bctr_SAR1_2 Shew_SAR2_2 GGGGGCG-----ACC-GGU--UUCGACGGGGUAAGA-----UAAUGAUAAGAUUGCAUGC--AGAGG-UUCGGGAU---CCUCUUUAAUA----------UCCCCGAA-AUAUCAAUAAAUGCCGAUUACGGCUAC------------------------------------------------------------AUGGCAGCUGCUUAA-----------------------UUAGCUCUGCC--------------------------CGCUCUGGAUUAAGUU----------------UGUCUGUGGUUUAAUCUAAGAGCG--------------------------------------------------------UCAUAAA-CGCAGACUG--GUCCCUGGAUUU-------------GUUUACUAGAAAGGGAUAA--GAUGUUUU--GUAAACUG------GUUGAUAUAUGGGUU-GUUAUUUG--UCCGCUAUAUCAAU----GAGAAUAAAU---CAGAUGACUAUGUA-UGUAG----------------------ACGUUUUGUUAG-----AAUCUAUCUCGGAC-GGGAGUUCGAAUCUCCC-CGCCUCCACau Shew_SAR2_2 Coxie_burne GGGGGCG-----ACCAGGC--UUCGACGUGGAUCCU-----GAAACCC-GAGACGCAUGU--CGAGC-CGGCAACGAAGGCUCGUAAAUCCAU-------CAGUUGCA--AACAGAUAGUUGCAAACGAUAGUAAU---------------------------------------------------UAUCUCCAAGAAGCUUACGCAUAA-------------------------AGCUUCUU---------------------------CCGUUGCUGGGAUUC------------------GCUUAUAGAUCCCUACCAACGG---------------------------------------------------------CCAUAGCAUAUAAGCUC--GCCCUCAAGCAUG--------------GCUCAUGACUUGAAGGU-UAAACAGAA---GAGC-UC------GCAGUCAAUUUCCCCU-GCACGUC--GGGCGAUUGACUGU----UAAAUCAUA----GACGAUGCUAAGCA-UGUAG----------------------UGUCAACGGCGG------AUGAUUUACGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCAuca Coxie_burne Methylococcales Mecoc_capsu GGGGGCG-----ACAUGGC--UUCGACGUGGAUCGC-----GAAACCU-GAGGUGCAUGC--CGAGG-UGCAGAUGA--CCUCGUAAAUC----------CAUCUGCA-AACCAAAUAAACGCCAACGACGACGUU---------------------------------------------------------UACGCACUGGCCGCUUAA-------------------------GCCGGCCGG--------------------------CCUCUGAUCAGCAGCUC----------------GCUUACAAGCGGCUGGUUGGGG-------------------------------------------------------GUAACCCAAUUGUAAGCUC--GCGCUGAAGUCUG--------------UCCGGGGCCGAAGCGC--UAAAACCCAA--CGGAAUC------GCCGUCCGUCUUCCCU-GCCACUC--GGGUAGCGUCCGGC----UAAAUCAAUA----GAGUGGAUACGCA-UGUAG----------------------AACCGAUGGCAG------AGGAUUUGCGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Mecoc_capsu Shew_SAR1_2 GGGGGCG-----AAUAGGG--UUCGACGUUUCUACU-----GGACUCC-GAAGCGCAUGC--CAAGA-UUGUAGUAAU-UCUUGUAAAACA---------UACUACAA--AAAAAAUAGUUGCAAAUAACGACAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA----------------------------UGCUAA--------------------------CCGAUGCAAGAAUU-------------------GACUGUGGUUUGAAGCAUCGGC---------------------------------------------------------UAAACA--CACAGUCUA--GCCAAGCUAUAUU-------------GCUUGGAUAUAGUUUGGU-AAAAACUUAAUCAAGC-UA-------GCUUUUAU--GCCCU-GCUCUUC--GGGUGAUAAAAGU----UAAAAAUAAUA---GAAUGAGCUAUGCA-UGUAG----------------------AAGUUAGGCUGA------AGGAUUGACGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Shew_SAR1_2 Uncult_EBAC GGGGGCG-----AAUAGGG--UUCGACGUUUCUACU-----GGACUCC-GAAGCGCAUGC--CAAGA-UUGUAGUAAU-UCUUGUAAAACA---------UACUACAA--AAAAAAUAGUUGCAAAUAACGACAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA----------------------------UGCUAA--------------------------CCGAUGUAAGAAUU-------------------GACUGUGGUUUGAAGCAUCGGC---------------------------------------------------------UAAACA--CACAGUCUA--GCCAAGCUAUAUU-------------GCUUGGAUAUAGUUUGGU--AAAACUUAAUCAAGC-UA-------GCUUUUAU--GCCCU-GCUCUUC--GGGUAAUAAAAGU----UAAAAACAAUA---GAAUGAGCUAAGCA-UGUAG----------------------AAGUUAGGCUGA------AGGAUUAGCGGAC-GCGGGUUCAAUUCCCGC-CGCCUCCACCA Uncult_EBAC Pseudomonadales Azotb_vinel GGGGCCG-----AUUAGGA--UUCGACGCCGGUAAC-----GAAACUU-GAGGGGCAUGC--CGAGUU-GGUGGCAG-AACUCGUAAAUCCA-------CUGCUACA---AACUCAUAGUUGCCAACGACGACAAC---------------------------------------------------------UACGCUCUGGCGGCUUAA---------------------------UGC-CCCAG------------------------CAGUCUCCAGGGGAU------------------GCCUGUAAACCCGAAGAGACUG---------------------------------------------------------UCAGAUAGAACAGGAUC--GCCGCCAAGUUC-------------GCUGUAGACGUAACGGC---UAAAACUCA-UACAGC-UC---------GCCCAAAGCACCCUGCCCGUCGGGCCGCAAUGGGU-------UAACUCAAUA--GACAGGGCUAAGCA-UGUAG----------------------AACCGAUAGCGG------AGAGCUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Azotb_vinel Uncul_bone1 NNNNNNN-----NNNNNNN--NNNNNNNNNNNNNNN-----NNNNNNN-NNNNNNNNNNN--NNNNNN-NNNNNNNN-NNNNNNNNNNNNNN-------NNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------------------------------------NNNNNNNNNNNNNNNNNN--------------------------C--CUUCGGGCAC---------------------CCCGAGGGUCAGGAU-------------------UCGGCUCGAGCGAAGUGAUUG---------------------------------------------------------UCAGAUAGAACAGGAUC--GCCGCCUAGUAC-------------GUUGUGGACGACGUGGC---UAAACAUUA-CACAAC-UC--------GCUCCA-AGCACCCUGCCACUCGGGCGGUGAGGAGU-------UAACUCAGUA--GAGAUGGCUAAGCA-UGUAG----------------------AACCGAUAGCGG------CGGACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Uncul_bone1 Psmon_aerug GGGGCCG-----AUUAGGA--UUCGACGCCGGUAAC-----AAAACUU-GAGGGGCAUGC--CGAGCU-GGUAGCAG-AACUCGUAAAUUCG-------CUGCUGCA---AACUUAUAGUUGCCAACGACGACAAC---------------------------------------------------------UACGCUCUAGCUGCUUAA---------------------------UGCGGCUAG------------------------CAGUCGCUAGGGGAU------------------GCCUGUAAACCCGAAACGACUG---------------------------------------------------------UCAGAUAGAACAGGAUC--GCCGCCAAGUUC-------------GCUGUAGACGUAACGGC---UAAAACUCA-UACAGC-UC--------GCUCCA-AGCACCCUGCCACUCGGGCGGCGCGGAGU-------UAACUCAGUA--GAGCUGGCUAAGCA-UGUAG----------------------AACCGAUAGCGG------AGAGCUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_aerug Psmon_syri1 GGGGCCG-----AUUUGGA--UUCGACGCCGGUGAU-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUUCUAUAGUUGCCAAUGACGAAAAC---------------------------------------------------UACGGUGCUCAACUAGCUGCGUAA------------------------GCAGCCUAGCCGCACUUCUGGUAGCUUCGGCUCCAGCAAUCAUCAGGGGAU------------------GCCUGUAAACCCAAAAUGAUUG---------------------------------------------------------UCAUAUAGAACAGGAUC--GUCGCCUAGUAC-------------GUUGUGGACGAAGCGAC---UAAAACUUA-CGCAAC-UC---------GCCCAAUGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUUAAUA--GACACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_syri1 Psmon_syri2 GGGGCCG-----AUUUGGA--UUCGACGCCGGUGAU-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUUCUAUAGUUGCCAAUGACGAAACC------------------------------------------------UACGGGGAAUACGCUCUCGCCGCGUAA-----------------------GCGGUGCUAGCCUUCCUUCUGGUAGCUUCGGCUCCAGCAAUCAUCAGGGGAU------------------GCCUGUAAACCCGAAAUGAUUG---------------------------------------------------------UCAUAUAGAACAGGAUC--GUCGCCUAGUAC-------------GUUGUGGACGAAGCGAC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUUAAUA--GACACGGCUAAGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_syri2 Psmon_syri3 GGGGCCG-----AUUUGGA--UUCGACGCCGGUGAU-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUUCUAUAGUUGCCAAUGACGAAAAC---------------------------------------------------UACGGUGCUCAACUAGCUGCGUAA------------------------GCAGCCUAGCCGCACUUCUGGUAGCUUCGGCUCCAGCAAUCAUCAGGGGAU------------------GUCUGUAAACCCAAAAUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GCUGUGGACGAAUCGGC---UAAAACUUA-CACAGC-UC---------GCCCAAAGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUUAAUA--GACACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_syri3 Psmon_fluo1 GGGGCCG-----UUUAGGA--UUCGACGCCGGUUGC-----GAAACUC-UAGGUGCAUGC--CGACUU-GGUAACAG-AAGUCGUAAAUCCA-------CUGUUGCA-ACUACUUAUAGUUGCCAAUGACGACCAA---------------------------------------------------UACGGUGCUGCUCUCGCUGCUUAA----------------------UUGCAGCUGACAUGCACUCCUGGUACCUUCGGGUCCAGCAAUCAUCAGGGGAU------------------GUCUGUAAACCCAAAAUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUUAAUA--GACACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_fluo1 Psmon_fluo2 GGGGCCG-----UUUAGGA--UUCGACGCCGGUCGC-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUCUUAUAGUUGCCAAUGACGAAAAC---------------------------------------------UACGGCCAGGAAUUCGCUCUCGCUGCGUAA------------------GCAGC---CUUAGCCCUGAGCUUCUGGUACCUUCGGGUCCAGCAAUCACCAGGGGAU------------------GUCUGUAAACCCAAAGUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCUUCGGGUCGCUGAGGGU-------UAACUUAAUA--GAAACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_fluo2 Uncul_cand1 GGGGCCG-----UUUAGGA--UUCGACGCCGGUUGC-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUCUUAUAGUUGCCAAUGACGAAAAC---------------------------------------------UACGGCCAGGAAUUCGCUCUCGCUGCGUAA------------------GCAGC---CUUAGCCCUGAGCUUCUGGUACCUUCGGGUCCAGCAAUCACCAGGGGAU------------------GUCUGUAAACCCAAAGUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCUUCGGGUCGCUGAGGGU-------UAACUUAAUA--GAAACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Uncul_cand1 Uncul_humn1 NNNNNNN-----NNNNNNN--NNNNNNNNNNNNNNN-----NNNNNNN-NNNNNNNNNNN--NNNNNN-NNNNNNNN-NNNNNNNNNNNNNN-------NNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------------------------NNNNNNNNNNNNNNNNNNNNNNNNNNN------------------NNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAUCACCAGGGGAU------------------GUCUGUAAACCCAAAGUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCUUCGGGUCGCUGAGGGU-------UAACUUAAUA--GAAACGGCUAAGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Uncul_humn1 Uncul_chck1 GGGGCCG-----UUUAGGA--UUCGACGCCGGUUGC-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUCUUAUAGUUGCCAAUGANNNNNNN------------------------------------------------NNNNNNNNNNNNNNNNNNNNNNNNNNN------------------NNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------NNNNNNNNNNNNNNNNNNNNNN---------------------------------------------------------NNNNNNNNNNNNNNNNN--NNNNNNNNNNNN-------------NNNNNNNNNNNNNNNNN---NNNNNNNNN-NNNNNN-NN---------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-------NNNNNNNNNN--NNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN------NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNN Uncul_chck1 Psmon_fluo3 GGGGCCG-----UUUAGGA--UUCGACGCCGGUUGC-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUCCUAUAGUUGCCAAUGACGAAACC------------------------------------------------UACGGGGAUUACGCUCUCGCUGCGUAA------------------GCAGC---CUUAGCCCUUCCCCCCUGGUACCUUCGGGUCCAGCAAUCAUCAGGGGAU------------------GUCUGUAAACCCAAAAUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUCAAUA--GACACGGCUAAGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_fluo3 Psmon_fluo4 NNNNNNN----NNNNNNNN--NNNNNNGCCGGUUGC-----GAACCUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUUCUAUAGUUGCCAAUGACGAAACC---------------------------------------------UACGGG---GAAUACGCUCUCGCUGCGUAA------------------GCAGC---CUUAGCCCUUCCCUCCUGGUACCUUCGGGUCCAGCAAUCAUCAGGGGAU------------------GUCUGUAAACCCAAAGUGAUUG---------------------------------------------------------UCAUAUAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUUAAUA--GACACGGCUACGCA-UGUAG----------------------UACCGACAGCAG------AGUACUGGCGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Psmon_fluo4 Psmon_chlor NNNNNNN-----NNNNNNN--NNNNNNGCCGGUUGC-----GAAACUU-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUCCUAUAGUUGCCAAUGACGAAACC------------------------------------------------UACGGGGAAUACGCUCUCGCUGCGUAA-----------------------GCGGCGCUAGCCUUCCUUCUGGUACCUUCGGGUCCAGCAAUCAUCAGGGGAU------------------GUCUGUAAACCCGAAAUGAUUG---------------------------------------------------------UCAUACAGAACAGAAUC--GCCGUGCAGUAC-------------GUUGUGGACGAAGCGGC---UAAAACUUA-CACAAC-UC---------GCCCAAAGCACCCUGCCCGUCGGGUCGCUGAGGGU-------UAACUCAAUA--GACACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Psmon_chlor Psmon_puti1 GGGGCCG-----AUUAGGA--UUCGACGCCGGUAGC-----GAAACUC-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA--ACUUUUAUAGUUGCCAAUGACGAAAAC---------------------------------------------UACGGCGCGGAGUACAAGCUGGCUGCGUAA------------------GCAGUCCUCUUGACCCGUUGCUUCUGGUAGCUUCGGCUCCAGCAAUCACUAGGGGAU------------------GCCUGUAAACCCGAACUGAUUG---------------------------------------------------------UCAUACAGAACAGGAUC--GUCGCGUAGCAC-------------GUUGUGGGCGAAGUGAC---UAAAACUUA-CACAAC-UC---------AUCCAAAGCACCCUGCCCGUCGGGCGGCUGCGGAU-------UAAAUCAGUA--GACACGGCUAAGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGGUUCAAAUCCCCC-CGGCUCCACCA Psmon_puti1 Psmon_puti2 NNNNNNN-----NNNNNNN--NNNNNNGCCGGUAGC-----GAAACUC-UAGGUGCAUGC--CGAGUU-GGUAACAG-AACUCGUAAAUCCA-------CUGUUGCA-ACUUUCUAUAGUUGCCAAUGACGAAACC------------------------------------------UACGGCGAGGAAACCUACGCUCUCGCAGCGUAA------------------G---------UGACCU-UUGCUUCUGGUAGCUUCGGCUCCAGCAAUCACUAGGGGAU------------------GCCUGUAAACCCGAACUGAUUG---------------------------------------------------------UCAUACAGAACAGGAUC--GUCGCGUAGCAC-------------GUUGUGGGCGAAGUGAC---UAAAACUUA-CACAAC-UC---------AUCCAAAGCACCCUGCCCGUCGGGCGGCUGCGGAU-------UAAAUCAGUA--GACACGGCUACGCA-UGUAG----------------------UACCGACAGCGG------AGUACUGGCGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Psmon_puti2 Morax_catar GGGGAUG-----UUCUGGC--UUCGACGCUGGUAGC-----GAAACCUAAUGAUGCAUGU--CAAGAG-CGUGUGA--CUCUUGUAAAUCA--------ACAUACAU---UUAAAAUAGUCGCAAACGACGAAACU---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------------GGGCUGCU-------------------------UAGGACGGCACAAAUU-----------------GCCUUUGGUUUGGUUGCUCUCCUA---------------------------------------------------GAUGCGAAUGCACAAAGGAUA--GCCAAAAUUAGC--------------GUUGCGAUGAUUUUGGCGAAAUUCUUA----GCAAAUC------GUCCAAUCC--AUCCU-GACUGUC-GGUU-CGGUGCGGAU----UAAAGCCAUA--GACAGAAUCUAAGCA-UGUAG----------------------AUUCAUAGAUGU------AGUACUGGCGGAC-GCGGGUUCGACUCCCGC-CAUCUCCACCA Morax_catar Acinbr_ADP1 GGGGAUG----UUAUUGGC--UUCGACGCUGGUGAU-----GAAGCUCAUAGAUGCAUGC--CGAGAG-CGCAUUUU-CUCUCGUAAAUAA--------AAUUUGCA---UUUUAAUAGUCGCAAACGACGAAACU---------------------------------------------------------UACGCUCUAGCUGCCUAA---------------------------GGGCAGUUU------------------------GUCCGCUUCCUAGAAU-----------------ACUUGUGGUUUAGGAACCCGAC----------------------------------------------------CGUAGCGCACGCACACAAGUCC--GUAUAGAGUCAA--------------GCCUCGGGGCUUUAUAC--CAAACUUA----GAGGAUC------GCAUCUUGU--ACCCU-GUUCGUC-GGGU-CACUGGGUGU----UAAAACAAUA--GACGAUAUCUAAGCA-UGUAG----------------------UAUUCUCGAGUG-----UAGUGCUGGCGGAC-GCGGGUUCAACUCCCGC-CAUCUCCACCA Acinbr_ADP1 Acinb_bauma NNNNNNN----NNNNNNNN--NNNNNNNNNNNNNNN-----NNNNNNNNNNNNNNNNNNN--NNNNNN-NNNNNNNN-NNNNNNNNNNNNN--------NNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------------------------------------NNNNNNNNNNNNNNNNNN---------------------------NNNNNNNNN------------------------NNNNNNNNNNNNNNNN-----------------NNNNNNNNNNNNNNNNNNNNNN----------------------------------------------------NNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNN--------------NNNNNNNNNNNNNNNNN--NNNNNNNN----NNNNNNN------NNNNNNNNN--NNNNN-NNNNNNN-NNNN-NNNNNNNNNN----NNNNNNNNNN--NNNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN-----NNNUGCUGGCGGAC-GCGGGUUCAACUCCCGC-CAUCUCCACCA Acinb_bauma Uncul_reman GGGGAUG----UUAUUGGC--UUCGACGCCGAUGAU-----GAAGCUCAUAGAUGCAUGC--CGAGAG-CGCAUUUU-CUCUCGUAAAUCA--------AAUUUGCA---UAUU-UUAGUCGCAAACGACGAAUCU---------------------------------------------------------UACGCUCUAGCUGCCUAA---------------------------GGGCAGCUU------------------------GUCCGCUUCACUGAAU-----------------ACUUGUGGUCAGUGGACCCGAC----------------------------------------------------UGUAGCGCACGCACACAAGUCC--GUAUAAAGUCAA--------------GCCUCGGGGCUUUAUAC--UAAACUUA----GAGGAUC------GCGUUUUGU--ACCCU-GUUCGUC-GGGU-CACUUAAUGU----UAAAAUAAUU--GACGAUAUCUAAGCA-UGUAG----------------------UAUUCUCGAGUG-----UAGUGUUGGCGGAC-GCGGGUUCAACUCCCGC-CAUCUCCACCA Uncul_reman Uncul_bone3 GGGGAUG-----UUCUGGC--UUCGACGCUGGUGAU-----GAAACUCAAUGAUGCAUGU--CGAGAG-UGUAUGUC-CUCUCGUUAAUCA--------AACAUAUA---UUGUUAUAGUCGCAAACGACGAAACU---------------------------------------------------------UACGCUCUAGCAGCUUAA---------------------------ACCCUGCUU------------------------ACUUAGUUGCUGAUC------------------ACCUACAGUUGGUUAACUAAGU----------------------------------------------------UGAAGCGUCCGCAUGUAGGCUC--GCCACAAGUGAUU-------------GUCUCAAUUGCUUGGGUU-CAAAAGUA---GAGAA-UC------GUCCAAUCC--AUCCU-GACUGUC-GGAU-CGGUGCGGAU----UAAAUUUAAA--GACAGAAACUAAACA-UGUAG----------------------AUUCAUGAGCGU------AAUGCUGGCGGAC-GCGGGUUCAACUCCCGC-CAUCUCCACCA Uncul_bone3 Psycb_cryha GGGGAUG-----UUCUGGC--UUCGACGCUGGUGAU-----GAAACUCAAUGAUGCAUGU--CGAGAG-UAUAUGUC-CUCUCGUUAAUCA--------AACAUAUA---UUGUUAUAGUCGCAAACGACGAAAAU---------------------------------------------------------UACGCUCUAGCAGCUUAA---------------------------ACCCUGUUU------------------------ACUUGGUUGCUGAUC------------------AUCUACAGUUGGUCAACUAAGU----------------------------------------------------UGAAGCGUCCGCAUGUAGAAGC--GCCACAAGUGAUU-------------GUCUCAAUUGCUUGGGUU-UAAAAGUA---GAGAA-UC------GUCCUAUCC--AUCCU-GACUGUC-GGAU-CGGUGCGGAC----UAAAACCAAA--GACAGAAACUAAACA-UGUAG----------------------AUUCAUGAGCGU------AAUGCUGGCGGAC-GCGGGUUCAACUCCCGC-CAUCUCCACCA Psycb_cryha Psycb_arcti GGGGAUG-----UUCUGGC--UUCGACGCUGGUGAU-----GAAACUCAAUGAUGCAUGU--CGAGAG-UAUAUGUC-CUCUCGUUAAUCA--------AACAUAUA---UUGUUAUAGUCGCAAACGACGAAAAU---------------------------------------------------------UACGCUCUAGCAGCUUAA---------------------------ACCCUGUUU------------------------ACUUGGUUGCUGAUC------------------AUCUACAGUUGGUCAACUAAGU----------------------------------------------------UGAAGCGUCCGCAUGUAGAAGC--GCCACAAGUGAUU-------------GUCUCAAUUGCUUGGGUU-UAAAAGUA---GAGAA-UC------AUCCUAUCC--AUCCU-GACUGUC-GGAU-CGGUGCGGAC----UAAAACCAAA--GACAGAAACUAAACA-UGUAG----------------------AUUCAUGAGCGU------AAUGCUGGCGGAC-GCGGGUUCAACUCCCGC-CAUCUCCACCA Psycb_arcti Psycb_urati NNNNNNN------NNNNNN--NNNNNNGCUGGUGAU-----GAAACUCAAUGAUGCAUGU--CGAGAG-UAUAUGUC-CUCUCGUUAAUCC--------AACAUAUA---UUGUUAUAGUCGCAAACGACGAAAAU---------------------------------------------------------UACGCUCUAGCAGCUUAA---------------------------ACCCUGUUU------------------------ACUUGGUUGCUGAUC------------------ACCUACAGUUGGUCAACUAAGU----------------------------------------------------UGAAGCGUCCGCAUGUAGGAUC--GCCACAAGGGAUU-------------GUCUCAAUCCUUUGGGUU-CAAAAGUA---GAGAC-UC------GGCUAAUCC--AUCCU-GACUGUC-GGAU-CGGUGCAGAC----UAAAAUUAAA--GACAGAAACUAAACA-UGUAG----------------------AUUCAUGAGCGU------AAUGCUGGCGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Psycb_urati Oceanospirillales Chrha_salex GGGGGCG-----ACAUGGC--UUCGACGCCGGUGAC-----AAUCCCU-GAGGUGCAUGC--CGAGAG-CGUAACGU-AUCUCGUAAAUCCA-------ACGUUACG---AUUAAAUAGUCGCAAACGACGACAAC------------------------------------------------UACGCUCAGGGCGCGCUGGCAGCGUAA--------------------------CAACUGCUAG------------------------CUUCUAGUCCGGCCCGGAGGUGAUGUG------CCCAUUCAUCACCGAUGGGAUACGAGC----------------------------------------------------UCAGACU-GAUGGGAUC--GCGGUUGGCCCUG-------------UCCUCGUGUCAGCCGC---UAAAACUUA--GAGGAAUC--------GCGUCGCUGGAUCCUGCCCGUCGGAGCCAGGGACGU-------UAAAUCAGAA--GACGGACCUAAGCA-UGUAG----------------------AGCCGAUGGGUG------AGUGCCGGCGGAC-GGGGGUUCAAUUCCCCC-CGCCUCCACCA Chrha_salex Alteromonadales Marbr_hydro NNNNNNN----NNNNNNNN--NNNNNNGCCGGUGAC-----GAACCCU-UGGGUGCAUGC--CGAGAU-GGCAGCGA-AUCUCGUAAAUCCA-------AAGCUGCA---ACGUAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUGGCGGCGUAA------------------------GCCGUU-CCAGU------------------------CGUCCUGGCUGAGGC------------------GCCUAUAACUCAGUAGCAACAUCCCAGGACG-----------------------------------------------UCAUCGCUUAUAGGCU----GCUCCGUUCACCAGA-----------GCUCACUGGUGUUCGGC--UAAGAUUAAA--GAGC-UC-------GCCUCU-UGCACCCUGACCUUCGGGUCGCUUGAGGU-------UAAAUCAAUA--GAAGGACACUAAGCA-UGUAG----------------------ACCUCAAGGCCU------AGUGCUGGCGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Marbr_hydro Marbr_aquae GGGGACG-----ACUUGGC--UUCGACGCCGGUGAC-----GAACCCU-UGGGUGCAUGC--CGAGAU-GGCAGCGA-AUCUCGUAAAUCCA-------AAGCUGCA---ACGUAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUGGCGGCGUAA------------------------GCCGUU-CCAGU------------------------CGUCCUGGCUGAGGC------------------GCCUAUAACUCAGUAGCAACAUCCCAGGACG-----------------------------------------------UCAUCGCUUAUAGGCU----GCUCCGUUCACCAGA-----------GCUCACUGGUGUUCGGC--UAAGAUUAAA--GAGC-UC-------GCCUCU-CGCACCCUGACCUUCGGGUCGCUUGAGGU-------UAAAUCAAUA--GAAGGACACUAAGCA-UGUAG----------------------ACCUCAAGGCCU------AGUGCUGGCGGAC-GCGGGUUCAAUUCCCGC-CGUCUCCACCA Marbr_aquae Micbu_degra GGGGGCG-----AUUAGGA--UUCGACGCCGGUAAC-----AAAACCC-GAAGUGCAUGU--CGUGAG-GGUAGCCA-AUCACGUAAAUCCA-------AAGCUGCA---AAUUAUCAGUUGCCAAUGAUGACAAC---------------------------------------------------UACGGUGCUCAACUAGCUGCGUAA-----------------------GUAGCUUUUUGUUACACCAUCUAGCGGUACGCCGCUAGCGGUUUUUAACA---------------------AGGUGCCAGUACCGC-------------------------------------------------------------GUUAACGACUGUCACUUAGAACUGGAUCGCAGUGAAGCCUG------CCUGGGGUGGAUCAGCU--AAACUUUU---ACAGGAUC-------GCGCUUU-UCGUCCCGCCCGCUGGGCUGUAAAGCGU-------UAAAUCAAUA---AGCGGUUCUAAGCA-UGUAG----------------------AGCUGACGGCGG------AGUACUGACGGAC-GGGGGUUCAAAUCCCCC-CGCCUCCACCA Micbu_degra Uncul_flatw GGGGACG-----ACAUGGC--UUCGACGCUGGUAAC-----AAAACCA-AAGGUGCAUGU--CGAGUG-UACAGUGG-CACUCGUACUCCAA-------UCGCUGUA----AUCAAUAGUUGCAAACGAUGACAAC---------------------------------------------------UACGGUGCUCAACUAGCUGCGUAA-----------------------GCAGUGAAAGAU--CACUUU-UAGGGUUACGACCCUAUCGGUCUCUAGCA---------------------AGGUGCCUGUAUCGC-------------------------------------------------------------GCUAUAGACUGUCAACUAGAACAGGAUCGUAAAGCGGCACA------CUCAGGGUUGUUUUACU--AAACUUAA---CUGAGAUC-------GCCAACC-ACGUCCUGCCCGUUGGGCUNNNNNNNNN-------NNNNNNNNNN---NNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN------NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNN-NNNNNNUNNNN Uncul_flatw Gamprb_SAR1 GGGGGCG----UAUUAGGC--UUUGACGUCUACCAC-----GGAACCC-AAAGUGCAUAC--CGAGC--ACGAACAU-AACUCGUAAAAUAU-------UGUUUAAA----ACAAAUAGUUGCAAAUAAUUACAAC---------------------------------------------------------UAUAGUUUGGCAGCUUAA-------------------------UGCCAAC----------------------------CUGUUAUCAUUUGU------------------GACCUACAACAUUUGAUAACGG---------------------------------------------------------UCAUUUUAGUAGGAUAUA--CUCUACCAG-----------------AGCCCACUU-GUAGAGC--GAAUUUAA---GGGCU-UA-------GCUUAGU-GUGUCUUGAUCAUCAGGCUACACCAAAGU------GAAUUAAAUU---GAUGAAUCUAAGUA-UGUAG----------------------AGACUAGGGGAA------AGUGAUGACGGAC-GUGGGUUCAAAUCCCGC-CGCCUCCACCA Gamprb_SAR1 Colwe_psych GGGGCGG----AUCUAGGA--UUCGACAAGAUUCAU-----GAAACUC-AAGGUGCAUGC--CCAGG--GGCGGUUU-GCCUGGUAAA-----------AAGCCGCA---AAACUAUAAUUGCUAACGACGAUACG---------------------------------------------------------UUCGCACUAGCCGCUUAG---------------------------GCUAG----------------------------CCAUCGCCUUGAAAUCUC--------------UCCUAUUGGUUAGAGG---AU--CGAUGG--------------------------------------------------UCACCCCA-AAUAGGAUA--GCGAGGGAAGCAC------------GCUUGAGGCU-GAACCGC--GAAAUAGUA-UCAAGC-UC-------ACCAUGACGAAGCCUGUCGCUUGGCGUCUAAUUGGU-------UAAAUAAAU----GAG-CGACUAAGCA-UGUAG----------------------UACCGAGAACGU------AGGCUUUUUGGAC-GGGGGUUCGAUUCCCCC-CCGCUCCACCA Colwe_psych Psalt_halop NNNNNNN----NNNNNNNN--NNNNNNGGAAUUCAA-----GAAGCCC-GAGGUGCAUGU--CGAGG--UGCGGUUU-GCCUCGUAAAA----------AAGCCGCA-AUUUAAAGUAAUCGCAAACGACGAUAAC---------------------------------------------------------UACUCUCUAGCAGCUUAG-----------------------GCUGGCUAG----------------------------CGCUCCUUCCAUGUAU----------------UCUUGUGGACU--GGA--UUUU-GGAGUG--------------------------------------------------UCACCCUAACACCUGAUC--GCGACGGAAACCCU------------GGCCGGGGUUGAAGCGU--UAAAACUAAG-CGGCC-UC-------GCCUUUAUCUACCGUGUUUGUCCGGGAUUUAAAGGU-------UAA-UUAAAU---GACAAUACUAAACA-UGUAG----------------------UACCGACGGUCG------AGGCUUUUCGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Psalt_halop Psalt_halo2 GGGGCUG-----AUUAGGA--UUCGACGGAAUUCAA-----GAAGCCC-AAGGUGCAUGU--CGAGG--UGCGGUUU-GCCUCGUUAAA----------CAGCCGCA-ACCUAAAGUAAUCGCAAACGACGAUAAC---------------------------------------------------------UACUCUCUAGCGGCUUAG-----------------------GCCAGCUAG----------------------------CGCUCCUUCUAUGUAU----------------UCUUGUGGACU--AGA--UUUU-GGAGUG--------------------------------------------------UCACCCUAACACCUGAUC--GCGAUGGAAACCCU------------GGCCGGGGUUGAAGCGU--UAAAACUAAG-CGGCC-UC-------GCCUUUAUUUACCGUGUUUGUCCGGGACUUAAAGGU-------UAAUUAAAU----GACAAUACUAAGCA-UGUAG----------------------UACCGACGGUCG------AGGCUUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Psalt_halo2 Psalt_atlan GGGGCUG----AUUUUGGA--UUCGACAAGAUUCUU-----GAGGCUU-UAGGUGCAUGC--AGAGG--AGCGGUUU-GCCUCUUAAA-----------AAGCCGCA---UUUAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUCUAGCCGCUUAA---------------------------UAACCGGCUAAGC------------------------CCUUCCACUCAUACUCU---------------UUCUGCUAGUA--GAG--GUUC-GGAAGG--------------------------------------------------UCAUCCC--AGCAGAAUA--GCGAGGGA-ACCUU------------GUCUAAGGGUGAACCGC--GAAAUAGUAU-UAGGC-CC-------GCUAUGAGAAAUCCUGUCUGCCGGAGUUCGAAAUAGU------UAAAUAAAA----GAC-AGAAUAAGCA-UGUAG----------------------UACCGACGGUUA------ACGUUUUUUGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Psalt_atlan Shewa_oneid GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-UGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---AAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCCGCUUAA-----------------------UGCCGCUAG----------------------------CCAUCUACCACACGCUUU--------------GCACAUGGGCAGUGGA--UUU---GAUGG--------------------------------------------------UCAUCUCACAUCGUGCUA--GCGAGGGAACCCU-------------GUCUGGGGGUGAACCGC--GAAACAGUA-CCGGAC-UC-------ACCGUGUGGGAUCCUGUCUUUCGGAGUUCAAACGGU-------UAAACAAUA----GAA-AGACUAAGCA-UGUAG----------------------CGCCUUGGAUGU------AGGUUUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_oneid Shewa_putre GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-UGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---CAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCAGCUUAG-----------------------GCUAGCUAG----------------------------CCAUCUGACACAGGUCUC--------------UCAAAUGGGCGGUGUA----UACAGAUGG--------------------------------------------------UCAUCUUACAU-UUGAUA--GCGAGGGAACUCC-------------GUCCGGGGGUGAACCGC--GAAAUAGUA-CCGGAC-UC-------GCCCGAUGAAAUCCUGUCUUUCGGAGUUUAUUCGGGU------UAAUUAAAA----GAG-AGACUAAGCA-UGUAG----------------------UGCCUUGGAUGU------AGGUGUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_putre Shewa_spPV4 GGGGGCG----AUUCUGGA--UUCGACAAGAUUCAC-----GAAACCC-UAGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---CAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCAGCUUAG-----------------------GCUAGCUAG----------------------------CCAUCUUGCUCACGUUUC--------------UCAAAUGGGCAGAGUA----UUAAGAUGG-------------------------------------------------UCACCUUUACAU-UUGAUA--GCGAGGGAACCAU-------------GUUCAGGGGUGAACCGC--GAAACAGUA-CUGAAC-UC-------GCCAAUAACAAUCCUGUCUUUCGGAGUGUUGUUGGU-------UAACCAAUA----GAA-AGACUAAGCA-UGUAG----------------------CGCCGAGGAUGU------AGGCUUUUUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_spPV4 Shewa_denit GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-AAGGAGCAUGU--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---CCGUUAUAGUUGCAAACGACUCUAAC---------------------------------------------------------UACUCUCUAGCAGCUUAG-----------------------GCUAGCUAG----------------------------CCAUCUGACCCAGGUUUC--------------UCAAAUGGGCGGGGUA----UACAGAUGG--------------------------------------------------UCAUAUAACAU-UUGAUA--GCGAGGGAACUCC-------------GUCCGGGGGUGAACCGC--GAAACAGUA-CCGGAC-UC-------GCCAUGUAGCAUCCUGUCUUUCGGAGACUGCCUGGU-------UAACUAAAA----GAG-AGACUAAACA-UGUAG----------------------CGCCGAGGAUGU------AGGCUUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_denit Shewa_frigi GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-AAGGAGCAUGU--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---CCGUUAUAGUUGCAAACGACUCUAAC---------------------------------------------------------UACUCUCUAGCAGCUUAG-----------------------GCUAGCUAG----------------------------CCAUCAACCACACGUUUC--------------GCACGUGGACAGUGGA----UUCUGAUGG--------------------------------------------------UCAUAUUACAGUGUGCUA--GCGAGGGAACUCC-------------GUCCGGGGGUGAACCGC--GAAACAGUA-CCGGAC-UC-------ACCAAGUAGCAUCCUGUCUUUCGGAGACUGCUUGGU-------UAAAUAAAA----GAG-AGACUAAACA-UGUAG----------------------UGCCGAGGAUGU------AGGCUUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_frigi Shewa_amazo GGGGGCG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACUC-CGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---AAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUGGCUGCUUAA----------------------UUAGCGCCAG----------------------------CCAUCUACCACAGGUCUC--------------GCACAUGGGCAGUGGA-----UUUGAUGG--------------------------------------------------UCACCUUACAUCGUGCUA--GCGAGGGAACCUU-------------GUCUGGGGGUGAACCGC--GAAACAGUU-CCAGGC-UC-------ACCGUUAGAAAUCCUGUCUUUCGGAGUUCGAGCGGU-------UAAAUAAAA----GAG-AGACUAAGCA-UGUAG----------------------CGCCUUGAGCGU------AGGUUUUUCGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_amazo Shewa_balti GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-UGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---CCGUUAUAGUUGCAAACGACUCUAAC---------------------------------------------------------UACUCUCUAGCAGCUUAG-----------------------GCUAGCUAG----------------------------CCAUCUGACACAGGUCUC--------------UCAAAUGGGCAGUGUA----UACAGAUGG--------------------------------------------------UCAUCCUACAU-UUGAUA--GCGAGGGAACUCC-------------GUCCGGGGGUGAACCGC--GAAAUAGUA-CCGGAC-UC-------GCCCGAUGAAAUCCUGUCUUUCGGAGUUUAUUCGGGU------UAAUUAAAA----GAG-AGACUAAGCA-UGUAG----------------------UGCCUUGGAUGU------AGGUGUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewa_balti Shew_SAR1_1 GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-UGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-UAA----------AAGCCGCA---AAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCCGCUUAA-----------------------UGCCGCUAG----------------------------CCAUCUACCACACGCUUC--------------GCACAUGGGCAGUGGA--UUU---GAUGG--------------------------------------------------UCAUCUCACAUCGUGCUA--GCGAGGGAACCCU-------------GUCCGGGGGUGAACCGC--GAAACAGUA-CCGGAC-UC-------ACCGUUUGGGAUCCUGUCUUUCGGAGUUCAAACGGU-------UAAACAAUA----GAA-AGACUAAGCA-UGUAG----------------------CGCCUUGGAUGU------AGGUUUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shew_SAR1_1 Shewan_ANA3 GGGGGCG----AUUCUGGA--UUCGACAGGAUUCAC-----GAAACCC-UGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-UAA----------AAGCCGCA---AAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCCGCUUAA-----------------------UGCCGCUAG----------------------------CCAUCUACCACACGUUUC--------------GCACAUGGGCAGUGGA--UUU---GAUGG--------------------------------------------------UCAUCUCACAUCGUGCUA--GCGAGGGAACCCU-------------GUCCGGGGGUGAACCGC--GAAACAGUA-CCGGAC-UC-------ACCGUGUGGGAUCCUGUCUUUCGGAGUUCAAACGGU-------UAAACAAUA----GAA-AGACUAAGCA-UGUAG----------------------CGCCUUGGAUGU------AGGUUUUCUGGAC-GCGGGUUCAAGUCCCGC-CGCCUCCACCA Shewan_ANA3 Uncult_WW11 NNNNNNN----NNNNNNNN--NNNNACAGGAUUCAC-----GAAACCC-UGGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGU-AAA----------AAGCCGCA---CAGUUAUAGUUGCAAACGACGAUAAC---------------------------------------------------------UACGCUCUAGCAGCUUAG-----------------------GCUAGCUAG----------------------------CCAUCUGACACAGGUCUC--------------UCAAAUGGGCGGUGUA----UACAGAUGG--------------------------------------------------UCA-UCUUACAUUUGAUA--GCGAGGGAACUCC-------------GUCCGGGGGUGAACCGC--GAAAUAG-UACCGGAC-UC-------GCCCGAUGAAAUCCUGUCUUUCGGAGUUUAUUCGGGU------UAAUUAAAA----GAG-AGACUAAGCA-UGUAG----------------------UGCCUUGGAUGU------AGGUGUUCUGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_WW11 Idiom_loihi GGGGCUG-----AUCUGGA--UUCGACGGGAUACAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGAGGCAG-GCCUCGUAAAA-----------AGCCUCA---ACCUAAUAGUUGCAAACGACGACAAC---------------------------------------------------------UACGCUCUAGCGGCUUAA---------------------UAACCCGCUA--AGC------------------------CCAUCCCCCGGCGCUUU----------------GUCUGCGAGACCGGA----CCAGGAUGG-------------------------------------------------CUCAAACUAAUGUAGACUC--GCGU-GGAGGCUUU------------GUCCGGAGCUGAAGCGU--UAAAACCAA-UCGGAC-UC------GUCAGUUGUGAAGCCUGUCAGUCGGC-GUCACACUGAU------UAACUAAAA----GAC-UGACUAAGCA-UGUAG----------------------GACCGAGGAUGU------AGGUAUUGCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Idiom_loihi Vibrionales Phobm_phosp NNNNNNN----NNNNNNNN--NNNNNNAGGAUCACG-----AAGGCUU-GUGGAGCAUGU--CGAGG--UGCGGUUU-GCCUCGUUAAA----------CAGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UACCCUGCUAAGAGCG-----------------------CUCCUGCCCUAGCUUCC----------------GCUUGUAAGACGGGGAAUAA--CAGGGG-------------------------------------------------UUCAAACCCAAACGAGAUA--GCGAGGGAUUCUUUGA---------CUAGAGAGA-UGAACCGC--GAAAUAGAA-UUCUGG-UA------UGUAUUAGCAUAGCGUGUCAAUUCGCAGUGACGAUACG------AGAA-UAAA----GAU-UGACUAAACA-UGUAG----------------------CGCCAUCUGUUA-----GACUGAUUUUGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Phobm_phosp Phobm_profu GGGGCUG----AUUCAGGA--UUCGACAGGAUCAAG-----AAGGCUU-GUGGAGCAUGC--CGUGG--GGCGGUUG-GCCACGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UUCGCACUAGCAGCUUAA---------------------UAACCUGCUAG-CGCA-----------------------CUUCUACCCUAGCUUCC----------------GCUUGUAAGACGGGGAAUCA--UAGAAG-------------------------------------------------UUCAAACCCAAACGAGAUA--GCGAGGGAACCUUUGA---------CUAGAGAGG-UGAACCGC--GAAAUAGAA-UUCUGG-UA------UGUAUUUACAUGGCGUGUCUGUUCGCAGUGUACUUACG------AGAA-UAAA----GAU-AGACUAAGCA-UGUAG----------------------CGCCUAUGGUUG-----GAUUGCUCUUGGAC-GCGGGUUCAAAUCCCGC-CAGCUCCACCA Phobm_profu Vibro_fisch GGGGCUG----AUUCAGGA--UUCGACGGGAAUUUU-----GAAACCC-GAGGAGCAUGU--CGUGG--GGCGGUUG-GCCACGUAAA-----------AAGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUGAGAGC------------------------UCUCCUGCCCUAGCUUCU---------------GCUUGUAAGACGGGGAAUAA-CAGGGGA--------------------------------------------------UCAAACCCAAACGAGCUA--GAAC-GGAUUCUCCC----------GCCUGAGAGAUGAACUUC--GAAUUAUAAUUCAGGA-UA-------GCCAUAAGAUAGCGUGUCGGUUCGCAGUUUUACGGU-------GAAAUCAAA----GAU-CGACUAAACA-UGUAG----------------------CGCCAACGGUGA------ACGAUUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Vibro_fisch Vibro_chole GGGGCUG----AUUCAGGA--UUCGACGGGAAUUUU-----GCAGUCU-GAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UACCCUGCUCAGAGC------------------------CCUUCCUCCCUAGCUUCC---------------GCUUGUAAGACGGGGAAAUC-AGGAAGG--------------------------------------------------UCAAACCAAAUCAAGCUG--GCGU-GGAUUCCCCC----------ACCUGAGGGAUGAAGCGC--GAGAUCUAAUUCAGGU-UA-------GCCAUUCGUUAGCGUGUCGGUUCGCAGGC-GGUGGU-------GAAAUUAAA----GAU-CGACUAAGCA-UGUAG----------------------UACCAAAGAUGA------AUGGUUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Vibro_chole Vibro_chol2 NNNNNNN----NNNNNNNN--NNNNNNNNNNNNNNN-----NNNNNNN-NNNNNNNNNNN--NNNNN--NNNNNNNN-NNNNNNNNNNN----------NNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------------------------------------NNNNNNNNNNNNNNNNNN---------------------NNNNNNNNNNNNNNN------------------------NNNNNNNNNNNNNNNNNN---------------NNNNNNNNNNNNNNNNNNNN-NNNNNNN--------------------------------------------------NNNNNNNNNNNNNNNNNN--NNNN-NNNNNNNNNN----------NNNNNNGGGAUGAAGCGC--GAGAUCCAAUUCAGGU-UA-------GCCAUUCGUUAGCGUGUCGGUUCGCAGGC-GGUGGU-------GAAAUUAAA----GAU-CGACUAAGCA-UGUAG----------------------UACCAAAGAUGA------AUGGUUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Vibro_chol2 Vibro_sEx25 GGGGCUG----AUUUAGGA--UUCGACGGGAAUUCA-----GAAGUCU-GAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUCAGAGC------------------------UCUCUCGCCCUAGCUUCC---------------GCACGUAAGACGGGGAAUAA-CGAGGGA--------------------------------------------------UCAAACCCAAACGCGCUA--GCCC-GGAUUCUCCC----------GCCUGAGAGAUGAACGGC--GAAUUUUAAUUCAGGC-UA-------GUCAUUCAUUAGCGUGUCGGUUCGCAGGUGGGUGGC-------GAAAUUAAA----GAU-CGACUAAGCA-UGUAG----------------------UACCAAUGAUGA------ACGGUUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Vibro_sEx25 Vibro_parah GGGGCUG----AUUUAGGA--UUCGACGGGAAUUCA-----GAAGUCU-GAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UACCCUGCUCAGAGC------------------------UCUCUCGCCCUAGCUUCC---------------GCACGUAAGACGGGGAAUAA-CGAGAGA--------------------------------------------------UCAAACCCAAACGCGCUA--GCCC-GGAUUCUCCC----------GCCUGAGAGAUGAACGGC--GAAUUAUAAUUCAGGA-UA-------GUCAUUCAUUAGCGUGUCGGUUCGCAGGUGGAUGGU-------GAAUUUAAA----GAU-CGACUAAGCA-UGUAG----------------------UACCAAUGAUGA------AAGGUUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Vibro_parah Vibro_vulni GGGGCUG----AUUUAGGA--UUCGACGGGAAUUUU-----GCAGUCU-GAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAAACUGCUCAGAGC------------------------CCUCUCGCCCUAGCUUCC---------------GCUUGUAAGACGGGGAAUCA-CGAGGGG--------------------------------------------------UCAAACCAAAUCAAGCUG--GCGU-GGAUUCCCCC----------ACCUGAGGGAUGAAGCGU--AAGAUAUAAUUCAGGU-UA-------GCUAUUCAUUCGCGUGUCGGUUCGCAGGU-GGUAGU-------GAAAUUAAA----GAU-CGACUAAGCA-UGUAG----------------------UACCAAUGAUGA------AUGGUUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Vibro_vulni Aeromonadales Aermo_hydr1 GGGGCUG----AUUCUGGA--UUCGACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGCUAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUGGCAGCUUAA---------------------UAACCUGCGCAGAGC------------------------CCUUCUACCCUAGCAU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUUCGUGGCGUGUCUCUCCGCAGCGGGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UGCCAAGGAUGU------AGUAAUUUUGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Aermo_hydr1 Aermo_hydr2 GGGGCUG----AUUCUGGA--UUCGACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGCUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUUCGUGGCGUGUCUCUCCGCAGCGGGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UGCCAAGGAUGU------AGUAAUUUUGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Aermo_hydr2 Aermo_salmo NNNNNNN----NNNNNNNN--NNNNNNAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCAUAGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUUCGUGGCGUGUCUCUCCGCAGCGGGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Aermo_salmo Uncult_VLW3 NNNNNNN----NNNNNNNN--NNNNACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGCUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUUCGUGGCGUGUCUCUCCGCAGCGGGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLW3 Uncul_VLS13 NNNNNNN----NNNNNNNN--NNNNACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGCUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUUCGUGGCGUGUCUCUCCGCAGCGGGUUGGC-------GAAUGUAAA----GAG-UGACUACGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncul_VLS13 Uncultu_WW9 NNNNNNN----NNNNNNNN--NNNNACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGCUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUGCGUGGCGUGUCUCUCCGCAGCGUGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW9 Uncult_WW10 NNNNNNN----NNNNNNNN--NNNNACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAGUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGUUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UCGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GUCAAUGCGUGGCGUGUCUCUCCGCAGCGUGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_WW10 Uncult_VLW5 NNNNNNN----NNNNNNNN--NNNNGCAAGAUUCAC-----GAAA-CC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGCUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUCCCCUAGCUU----------------GCCUGUGUCCUAGGGAA----UUGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AAUCGAGC-UA-------GU-AAUGCGUGGCGUGUCUCUCCGCAGCGUGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLW5 Uncult_VLW6 NNNNNNN----NNNNNNNN--NNNNACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUCGCAGCUUAA---------------------UAACCUGCGCUGAGC------------------------CCUUCUCCCCCAGCUU----------------GCCUGUGUCCUAGGGAA----UUGGAAGG--------------------------------------------------UCA-UCCUUCACAGGAUC--GUGUGGAAGUCCU-------------GCUCGGGGCGGAAGCAU--UAAAACC-AUUCGAGC-UA-------GUCAAUGCGUGGCGUGUCUCUCCGCAGCGUGUUGGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLW6 Uncult_RCA4 NNNNNNN----NNNNNNNN--NNNNACGGGACACUC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAU----------AAACCGCA----AAAAAUAGUCGCAAACGACGAAACC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCGGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUAUGUCCUAGGGGA----UUGGAAGG--------------------------------------------------UCA-UCUUUCAUAGGAUC--GCGUGGAAACCUU-------------GUCUGGGGUGGAAGCGU--UAAAACU-AAUCAGAC-UA-------GUUAUUCAGUGGCGUGUCGGUCCGCAGCUGGAUGGU-------GAAUGUAAA----GAUUCGACUAAGCA-UGUAG----------------------UACUGAGGAUGU------AGGUUUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_RCA4 Uncult_RCA7 NNNNNNN----NNNNNNNN--NNNNACGGGACACUC-----GAAACCC-AAGGUGCAUGC--CGAGG--U-CGGUAG-GCCUCGUUAAU----------AAACCGCA----AAAGAUAGCCGCAAACGACGAAACC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCGGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUAUGUCCUAGGGGA----UUGGAAGG--------------------------------------------------UCA-UCUUUCAUAGGAUC--GCGUGGAAACCUU-------------GUCUGGGGUGGAAGCGU--UAAAACU-AAUCAGAC-UA-------GUUAUUCAGUGGCGUGUCGGUCCGCAGCUGGAUGGU-------GAAUGUAAA----GAUUCGACUAAGCA-UGUAG----------------------UACUGAGGAUGU------AGGUUUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_RCA7 Uncult_LEM1 NNNNNNN----NNNNNNNN--NNNNACGGGACACUC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAU----------AAACCGCA----AAAAAUAGUCGCAAACGACGAAACC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCGGAGC------------------------CCUUCUACCCUAGCUU----------------GCCUAUGUCCUAGGGGA----UUGGAAGG--------------------------------------------------UCA-UCUUUCAUAGGAUC--GCGUGGAAGCCUU-------------GUCUGGGGUGGAAGCGU--UAAAACU-AAUCAGAC-UA-------GUUAUUCAGUGGCGUGUCGGUCCGCAGCUGGGUGGC-------GAAUGUAAA----GAUUCGACUAAGCA-UGUAG----------------------UACUGAGGAUGU------AGGUUUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_LEM1 Uncult_LEM2 NNNNNNN----NNNNNNNN--NNNNACGGUACACUA-----GAAAACC-AAGGUGCAUAC--CGAGG--UGCGGUAG-CCUUCGUUAAU----------AAACCGCA----AAAGAUAGUCGCAA-CGACGAAACG---------------------------------------------------------CACGCUUUAGCAGCUUAA---------------------UAUGCUGCUAGGACU------------------------CCUUCUNNACUAGCUU----------------GCUUAUGUCCUAGGGGA----UUGAAAGG--------------------------------------------------UCA-UCUUUCAUAGAGAC--GCGUGGAAGCCCU-------------GUCUGGGGUGGAAGCGU--CAAAACU-AAUCAGGC-AA-------GUUAUGCAAUGGCGUGGCGGACCGGAGCUGGGUGGC-------GAAUGGAAA----GAUUCGACUAAGCA-UGUAG----------------------UACUGAGGAUGU------AGUAUUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_LEM2 Enterobacteriales Wiggl_gloss GGGGCUG----AUUAUGGA--UUCGACGAAAUAAAC-----AAAACUA-AAGAUGCAUGU--CGAGC--AGAGGUGG-A-CUCGUAAA------------ACCUCAA----AUUGAUAAUUGCAAAACAUAAGUAC------------------------------------------------AACGAGCCUGCUCUAUUAGCAGCUUAA------------------------UUAGAAUAAAAUCUUAGGCUC---------------CUUCUUAGAUAUAUU-----------------AUCUCUAGAUGUAUCA-----AUAGAAG---------------------------------------------------UCAAA---AUUAGAGAUC--GCGA-UAUGAACGG----------GCUUGUACGUUCC-UACGC--UAAAAUAA-UACAAGA-UA-------AUUUUUAGUUCACACUUCUUUCUGUAGAACUAAAAAU--------AUUUAA-----GAA-AGAAUAAACA-UGUAG----------------------UAUCAAUAGAAU------UGAAGUUUCGGAC-GCGGGUUCAAAUCCCGC-CAGCUCCAuau Wiggl_gloss Bloch_flori GGGGCUG----AUUUAGGU--UUCGACUGAAUGUCU-----UUGUGUUUGCAGUGCAUGU--CGAGG--GGAGAUAG-GCCUCGUAAAA---------AAAUCUCAA-----AAAAUAAUUGCAAAAAAUAAAUAU------------------------------------------------AAUGAACCUGUUGCAUUAGCAGCUUAA----------------------UUGGGUUAAUAACCUAAAGGUUC---------------CCUCUUAAUUUUUUUGUU--------------ACUCUUAACAAGAAAAUCAUUAUCUCAUAAGAGG---------------------------------------------UCUAUA--AAUAAGAGCG--CUCA-UUAUAAAGU-----------GCCUAACUCUAUAAUGAUAAGAAUAAAAAUUAGAGC-UA------AUUGAUUAAUUGACAUGAUCUUAAGUCAUUUUUCAAU---------AAAAUA----UUAAAGAUCUAAACA-UGUAG---------------------UAUCUGGA-AAAUAU----AAGAAUUCUGGAC-GCGGGUUCGAAUCCCGC-CAGCUCCAuuu Bloch_flori Bloch_penns GGGGCUG----AUUUUGGA--UUCGACGGAGUAUCU-----UGUUAUUUAAAGUGCAUGC--CGAGG--UGAGGCAG-GCCUCGUAAAA----------AGCCUCAA-----AAGAUAAAUGCAAAUAAUACUACA---------------------------------------------UAUAGAGAAUCUGUUGCUUUAGCAGCUUAA---------------------AUCAGACUAAUAUUCUGAAGGUUC---------------CCUCUCGUUUCAAUAUUU--------------ACUCUUAGAUAUUAAAAAAUAAAUAGAGAGG------------------------------------------------CCAUAUA-AAUAAGAGUGC-GCGU--AAAUGCUU-----------GCUUUUGGCUUA--ACGU--UAAGUAUA--AAAAGC-UA------GUUGGUUAG-UGAUUGGUCUUGAUAUAUCUACGCCAAU------UAAAUGUAA---UUCAAGACCUAAGCA-UGUAG---------------------GUUACUAAAAAUAAA----AAGAAUUCUGGAC-GCGGGUUCGAACCCCGC-CAGCUCCACCA Bloch_penns Uncul_aphi1 GGGGCUG----AUUCUGGA--UUCGACGGGAUAAGC-----AAAGCCC-AAGGUGCAUGC--CGAGG--GGCGGUU--GCCUCGUAAAA-----------AACCGUG---AAAAAAUAGUNNNNNNNNNNNNNNNN------------------------------------------------------NNNNNNNNNNNNNNNNNNNNN---------------------NNNNNNNNNNNNNNN------------------------NNNNNNNNNNNNNNNNNN--------------NNNNNNNNNNNNNNNNN--NNNNNNNNNN--------------------------------------------------NNNNN---NNNNNNNNNNN-NNNNNNNNNNNN------------NNNNNNNNNNNNN-NNNNN-NNNNNNNN-NNNNNNNN-NN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------NNNNNNNNNNNN-NNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN------NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNN-NNNNNNNNNNN Uncul_aphi1 Uncul_aphi2 GGGGCUG----UUUUUGGA--UUUGACAAAAUUAUC-----AACAGAGUAAAGUGCAUGC--CGAGG--AACGGUUU-GCCUCGAUAA-----------AAGCCGUA---AAAUAAUAGCUGCAAAUAAUAAACAA------------------------------------------------------CACUACGCUUUAGCAGCUUAA---------------------AAAACUGUAUAAAGC------------------------CCUUUCUUCUCAGCCUCC---------------UCUCUUAGGACGAGAA-AUAAAGAAAGG--------------------------------------------------UCAAA---AAAAGAGAAAA-ACAUGAACAUCA------------AGCUUGACGAUGA-CAUGN-NNNNNNNN-NNNNNNNN-NN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------NNNNNNNNNNNN-NNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN-NNNNNNN-NN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Uncul_aphi2 Buchn_aphi1 GGGGCUG----UUUUUGGA--UUUGACAAAAUUAUC-----AACAAAGUAAAGUGCAUGC--CGAGG--AACGGUUU-GCCUCGAUAA-----------AAGCCGUA---AAAAAAUAAUUGCAAAUAAUAAACAA------------------------------------------------------AACUACGCUUUAGCAGCUUAA---------------------AAAACUGAAUAAAGC------------------------CCUUCCUUCUUAUCCUCC--------------UUCUCUUAGGAUGAGAA--AACAGGAAGG--------------------------------------------------UCAGA---AAAAGAGAAAA-ACGUGGAUAUCA------------AGCUUGACGAUAA-CACGA-AGUAGUUU-UUUCAAGC-UA--------UAUACCUAAUAUGUGUUUUUCCAAAUUAGGUAAU--------GAAUUCAAUAAA-GAAAAAACUAAGCA-UGUAG----------------------GGCUUUAUUAGU------AGAAAUUUUGGAC-GCGGGUUCGAAUCCCGC-CAGCUCCAaaa Buchn_aphi1 Buchn_aphi2 GGGGCUG----UUUUUGGA--UUCGACAAAGUUAUC-----AAAAAAGUAAAGUGCAUGC--CGAGG--AACGGUUU-GCCUCGAUAAA----------AAACCGUA---AAAAAAUAGCUGCAAAUAAUAAACAA------------------------------------------------------AACUACGCUUUAGCAGCUUAA---------------------AAAACUGUAUAAAGC------------------------CCUUUCAUCUCUGACUUC---------------UCUCUUGAGAACGAGAAAUUUUUAAGAAAGG-----------------------------------------------CCGACAUUUAAAGAGAAAA-AUGUGAGCACUA------------UGCUUGAUAGUGA-CACAA-AAUUAAUUU-UUCAAGC-UA--------UAAGCUUAAAAUGAGUUUUUCCAAAUUAAGCAAU--------GAAAA-AAUAAA-GAA-AAACUAAGCA-UGUAG---------------------UAUCUUUAUUUAU------AGAAAUUUUGGAC-GCGGGUUCAAAUCCCGC-CAGCUCCAaaa Buchn_aphi2 Buchn_aphi3 GGGGCUG----AUAUUGGA--UUUGACAAAAUUAUU-----GAAAACU-GAUGUGCAUGC--CGAGG---AUGGUUU-GCCUCGUUAAA----------AAACCAUA----AAAAAUAGUAGCAAAACAAAAUCAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAAUCUGAAUAAAGC------------------------CCUUCUUUUAAACAUAU----------------UCUCUUAAUGUUUAAUUUAUAUAGAAGG--------------------------------------------------UUAAU--CUAAAGAGAUC--GCAACUCAAAUCUA----------UUUUGAAAGAUUUUUUGUUGCUAAAUAAAAACUUCAAAAUA-------UAUAUCUAUAAUGAGUCUAUACAUCGAUAGAUAA--------GAAAAGAUA-----AUA-GACUAAGCA-UGUAG---------------------UAUCUGAAGUCGU------AAAAAUUUUGGAC-GCGGGUUCGAAUCCCGC-CAGCUCCAaaa Buchn_aphi3 Phorh_asymb GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAA-----------AAGCCGCA---AAAAAAUAGUUGCAAACGACAACGAA---------------------------------------------------------UACGCACUAGUAGCUUAA---------------------UAACCUGCAUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGAUCA--AGGGAGG--------------------------------------------------UCAAACCUAAAAGAGAUC--GCGU-GGAUGCCUU-----------GCCUGGGGUU-GAAGCGU--UAAAUCUAA-UCAGGC-UA-------GUUUGUUAGUGGCGUGUCUAUCCGCAGCUGGCAAGU-------GAAUGUAAA----GAUUAGACUAAGCA-UGUAG----------------------UACCAAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Phorh_asymb Phorh_lumin GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAA-----------AAGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAA---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCGCAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGAUCA--AGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAUGCCUU-----------GCCUGGGGUU-GAAGCGU--UAAAUCUAA-UCAGGC-UA-------GUUUGUGAGUGGCGUGUCUGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAUUAGACUAAGCA-UGUAG----------------------UACCAAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Phorh_lumin Shige_dyse1 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGACGU------AGGAAUUCCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Shige_dyse1 Shige_dyse2 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGACGU------AGGAAUUCCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Shige_dyse2 Shige_boydi GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGACGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Shige_boydi Shige_flexn GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Shige_flexn Shige_sonne GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Shige_sonne Esche_coli1 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Esche_coli1 Esche_coli2 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCACAGCUGGCAAGC-------GAAUGUAAA----GAC-URACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGAAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Esche_coli2 Esche_coli3 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGACGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Esche_coli3 Esche_coli4 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGAUGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Esche_coli4 Entbr_cloac NNNNNNN----NNNNNNNN--NNNNNNGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUU-GCCUCGUUAA-----------AAGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCUGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGAUGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAGCCCU------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-AAACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGAAAUUUCGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Entbr_cloac Entbr_aerog NNNNNNN----NNNNNNNN--NNNNNNGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACUCAAAAGAGAUC--GCGC-GGAUGCCCU------------GCCUGGGGUUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-AAACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGNNNNNNNNNNNNN-NNNNNNNNNNN Entbr_aerog Entbr_sakaz GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAUGCCCU------------GCCUGGGGUUGAAGCGU--UAAA-ACUAAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGCUGCCAGGC-------GAAUGUAAA----GACCGGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Entbr_sakaz Provi_rettg NNNNNNN----NNNNNNNN--NNNNNNGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUU-GGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAUGCCUU------------GCCUGGGGUUGAAGCGU--UAAA-CUUAAUCAGGA-UA-------GUUUGUUGGUGGCGUGUCUGUCCGCAGCUGGCAAAU-------GAAUUCAAA----GACUAGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGAAAUUUCNNNN-NNNNNNNNNNNNNNNNN-NNNNNNNNNNN Provi_rettg Serra_marc1 NNNNNNN----NNNNNNNN--NNNNNNGGGAUUUGC-----GAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UACCCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGACGUCCU------------GCCUGGGGCUGAAGCGU--UAAA-CUCAAUCAGGC-UA-------GUCUGUCAGUAGCGUGUCCAUCCGCAGCUGGCCGGC-------GAAUGUAAA----GAUUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Serra_marc1 Serra_marc2 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UACCCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAUGUCCU------------GCCUGGGGCUGAAGCGU--UAAA-CUCAAUCAGGC-UA-------GUCUGUCAGUAGCGUGUCCAUCCGCAGCUGGCCGGC-------GAAUGUAAA----GAUUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Serra_marc2 Panto_stewa GGGGCUG----AUUCUGGA--UUCGACGGGAUU-GU-----GAAGCCU-UAGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUGAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------ACUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAUGCCCU------------GCCUGGGGUUGAAGCGU--UAAA-CUUAAUCAGGC-UA-------GUCUGUCAGUGGCGUGUCCGUCCGCAGCUGACCGGC-------GAAUGUAAA----GACUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Panto_stewa Prots_mirab GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAGAUAGUCGCAAACGACAAUCAA------------------------------------------------------UAUAAAGCACUAGCAGCUUAA---------------------UAACCUGCCUAGAGC------------------------CUUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGGAG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAUGCCUA------------GCUUGGGGUUGAAGCGU--UAAA-UUUAAUCAAGC-UA-------GCUUAUUUGUGGCGUGUCUGUCCGCAGCAAGUAAGU-------GAAUUUAAA----GACUAGACUAAGCA-UGUAG----------------------UGCCGCGGAUGU------AGAAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Prots_mirab Prots_vulga NNNNNNN----NNNNNNNN--NNNNNNGGAAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAGAUAGUCGCAAACGACAAUCAG------------------------------------------------------UACGAAGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGU-GGAAACCUA------------GCUUGGGGUUGAAGCGU--UAAA-UAUAAUCAAGC-UA-------GCUUAUUUGUGGCGUGUCUGUUCGCAGCAAGUAAGU-------GAAAUUAAA----GAC-AGACUAAGCA-UGUAG----------------------UGCCGCGGAUGU------AGGAAUUUCGGAC-GGGGNNNNNNNNNNNNN-NNNNNNNNNNN Prots_vulga Klebs_pneum GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCUGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAUCU-AAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCUGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Klebs_pneum Klebs_aerog NNNNNNN----NNNNNNNN--NNNNNNGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCCUAAGACGGGGA-AUAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAAGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUUUGUCAGUGGCGUGUCCGUCCGCAGCUGGCCAGC-------GAAUGUAAA----GACUGGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCNNNN-NNNNNNNNNNNNNNNNN-NNNNNNNNNNN Klebs_aerog Erwin_carot GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----AAAGCCC-AAGGUGCAUGC--CGAGG--GGCGGUUU-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGGGC--UAAAUCU-AAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCUGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGACGGUAG------AGUAGUUCCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Erwin_carot Erwin_amylo GGGGCUG----AUUCUGGA--UUCGACAGGAUUUGC-----AAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUU-GCCUCGUUAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC------------------------------------------------UUCGCACCUGCUGCUUUAGCAGCUUAA-------------UCAGCUUAAUAAACUGAAGGUGU------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAAACUAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAUCC-AAUCAGGC-UA-------GUUUGUUAGUAGCGUGUCCGUUCGCAGCUAACCGGC-------GAAUGUAAU----AACUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUCUGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Erwin_amylo Erwin_chrys GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC------------------------------------------------UUCGCACCUGCUGCUUUAGCAGCUUAA-------------UCAGCCUAAGAAACUGAAGGUGU------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAUCC-AAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCUGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GACCAGACUAAGCA-UGUAG----------------------UACCGACGGUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Erwin_chrys Salmo_bongo GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAGACCCU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCGGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Salmo_bongo Salmo_ente1 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAACC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Salmo_ente1 Salmo_ente2 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGCCCU-------------GCCUGGGGUUGAGGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Salmo_ente2 Salmo_ente3 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAACC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Salmo_ente3 Salmo_ente4 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG-GGCUGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-AGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Salmo_ente4 Salmo_ente5 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAACC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCUU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-AGACUAAGCA-UGUCC----------------------UUCCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Salmo_ente5 Salmo_ente6 GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Salmo_ente6 Citbr_roden GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Citbr_roden Uncult_RCA1 NNNNNNN----NNNNNNNN--NNNNACAAGAUUCAC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGUAG-GCCUCGUUAAC----------AAACCGCA----AAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UACCCUGCUUAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCAUGGAAGUCCU-------------GCCUGGGGCUAAAGUGC--UAAAUCU-AAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCAUCCGCAGCUGACCGGC-------GAAUGUAAA----GAUUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGCAAUUUCGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_RCA1 Uncult_VLS1 NNNNNNN----NNNNNNNN--NNNNACAGGAUUUGC-----AAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUU-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUUGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GUUCUUAAGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAACUC--GCGUGAAUACCUU-------------GCCUGGGGUUGAAGCGC--UAAAAUCUAAUCAGGC-UA-------GUUUGUCAGUGGCGUGUCCGUUCGCAGCUGACCGGC-------GAAUGUAAA----GAU-GGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUCUGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS1 Uncult_VLS3 NNNNNNN----NNNNNNNN--NNNNACAGGAUUUGC-----AAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUU-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUUGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GUUCUUAAGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAACUC--GCGUGAAUACCUU-------------GCCUGGGGUUGAAGCGC--UAAAAUCUAAUCAGGC-UA-------GUUUGUCAGUGGCGUGUCCGUUCGCAGCUGACCGGC-------GAAUGUAAA----GAU-GGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUCUG-AC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS3 Uncult_VLS4 NNNNNNN----NNNNNNNN--NNNNACAGGAUUUGC-----AAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUU-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUUGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GUUCUUAAGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAACUC--GCGUGAAUACCUU-------------GCCUGGGGUUGAAGCGC--UAAAAUCUAAUCAGGC-UA-------GUUUGUCAGUGGCGUGUCCCUCCGCAGCGUG-UUGC-------GAAUGUAAA----GAG-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGUAAUUUUGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS4 Uncultu_WW1 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGGGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGUCCU-------------GCCUGGGGCUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUC-UGCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW1 Uncult_RCA2 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGAUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCUCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGUCCU-------------GCCUGGGGCUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_RCA2 Uncultu_WW2 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGGGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGUCCU-------------GCCUGGGGCUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUC-GCAGCUGGCGUGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW2 Uncultu_WW3 NNNNNNN----NNNNNNNN--NNNNACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCACCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGUCCU-------------GCCUGGGGCUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW3 Uncultu_QL1 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA----AAAAAUAGUCGCAAACGUCGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGCGGAUGUCCU-------------GCCUGGGGCUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCGGAC-GUGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_QL1 Uncultu_WW4 NNNNNNN----NNNNNNNN--NNNNACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGGAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA--UAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGACC--GCGCGGAUGUCCU-------------GCCUGGGGCUGAAGUGC--UAAAACU-AAUCAGGC-UA-------GUUCGUUAGUGGCGUGUCUGUCCGCAGCUGGCGUGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW4 Uncult_VLS6 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGAUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAGGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAUCU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCUGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS6 Uncultu_FS2 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAGGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAUCU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCUGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_FS2 Uncultu_WW5 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAGGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCUGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW5 Uncultu_WW6 NNNNNNN----NNNNNNNN--NNNNACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCUGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAGGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCUGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------CGCCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW6 Uncult_VLW1 NNNNNNN----NNNNNNNN--NNNNACGGGAAUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGGGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-AGACUUAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLW1 Uncult_VLS7 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACG-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCCGCCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-AGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS7 Uncult_VLS8 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCGCGUAAAA-----------AGCCGCA----AUAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAAGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACUUAAUCAGGC-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS8 Uncult_VLS9 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAGCCC-UAGGAGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UACCCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAUGUCCU-------------GCCUGGGGCUGAAGCGU--UAAACUC-AAUCAGGC-UA-------GUCUGUCAGUAGCGUGUCCAUCCGCAGCUGGCCGGC-------GAAUGUAAA----GAU-UGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GGGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLS9 Uncult_VLW2 NNNNNNN----NNNNNNNN--NNNNACGGGAUU-GU-----GAAGCCU-UAGGAGCAUGC--CGAGG--GGCGGUUU-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CUUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA-UC-AAGAGAAG--------------------------------------------------UCAAACCCAAAAGAGCUC--GUGUGGAUGUCUU-------------GCCUGGGGCUGAAGCAC--UAAAACU-AAUCAGGA-UA-------GUUUGGUAAUGGCGUGUCUAUCCGCAGUUGCCCGGC-------GAAUGUAAA----GAUAUGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncult_VLW2 Uncultu_WW7 NNNNNNN----NNNNNNNN--NNNNACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--GGCGGUUG-GCCUCGUAAAA-----------AGCCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UGCGCUUUAGCAGCUUAA---------------------UAACCUGCUAAGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-AUAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAAGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAACU-AAUCAGGC-UA-------GUUUGUCAGUGGC--GUUCCUCCGCAGCUGGCCAGC-------GAAUGUAAA----GACUGGACUAAGCA-UGUAG----------------------UGCCGAGGAUGU------AGGAAUUUCGGAC-GCGNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW7 Uncultu_WW8 NNNNNNN----NNNNNNNN--NNNNACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG---GCGGUUG-GCCUCGUAAAA-----------AGCCGCAAAAAAAAUAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCUGAGC------------------------CCUCUCUCCCUAGCUUCC---------------GCUCUUAAGACGGGGA-UCAAAGAGAGG--------------------------------------------------UCAAACCCAAAAGAGAUC--GCGUGGAGGCCCU-------------GCCUGGGGUUGAAGCGU--UAAAUCU-AAUCAGGC-UA-------GUCUGGUAGUGGCGUGUCUGUCCGCAGGUGCCAGGC-------GAAUGUAAA----GAC-UGACUAAGCA-UGUAG----------------------UACCGAGGAUGU------AGGAAUUUCGGAC-GCNNNNNNNNNNNNNNN-NNNNNNNNNNN Uncultu_WW8 Yersi_pesti GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGU-G-GCCUCGUAAAA-----------AACCGCA--AAAAAAAUAGUUGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGCUC--GUGUGGAAACCUU-------------GCCUGGGGUGGAAGCAU--UAAAAC-UAAUCAGGA-UA-------GUUUGUCAGUAGCGUGUCCAUCCGCAGCUGGCCGGC-------GAAUGUAAU----GAUUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_pesti Yersi_frede GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGU-G-GCCUCGUAAAA-----------AACCGCA---AAAAAAUAGUCGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UACCCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAAACUAAAAGAGCUC--GUGUGGAAACCUU-------------GCCUGGGGUGGAAGCAU--UAAAAC-UAAUCAGGA-UA-------GUUUGUCAGUGGCGUGUCCAUCCGCAGCUGGCCGGC-------GAAUGUAAU----GAUUGGACUAAGCA-UGUAG----------------------UACCGACGGUGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_frede Yersi_pseud GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGU-G-GCCUCGUAAAA-----------AACCGCA--AAAAAAAUAGUUGCAAACGACGAAAAC---------------------------------------------------------UACGCACUAGCAGCUUAA---------------------UAACCUGCUUAGAGC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGCUC--GUGUGGAAACCUU-------------GCCUGGGGUGGAAGCAU--UAAAAC-UAAUCAGGA-UA-------GUUUGUCAGUAGCGUGUCCAUCCGCAGCUGGCCGGC-------GAAUGUAAU----GAUUGGACUAAGCA-UGUAG----------------------UGCCGACGGUGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_pseud Yersi_enter GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGG-AG-GCCUCGUAAAA-----------AACCGCA--AAAAAAAUAAUUGCAAACGACUCGCAA------------------------------------------------UACGAAUCUGCUGCUUUAGCAGCUUAA-------------UCAGCCUAAGAAACUGAAGAUUC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGAUC--GCGUGGACACCUU-------------GCCUGGGGUGAAAGCGU--UAAACC-CAAUCAGGA-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUAACCGGC-------GAAUGUAAU----GACUGGACUAAGCA-UGUAG----------------------UGCCGACGGCGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_enter Yersi_inmed GGGGCUG----AUUCUGGA--UUCGACGGGAUUCGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGA-G-GCCUCGUAAAA-----------AACCGCA--AAAAAAAUAAUUGCAAACGACUCGCAA------------------------------------------------UACGAAUCUGCUGCUUUAGCAGCUUAA-------------UCAGCCUAAGAAACUGAAGAUUC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGAUC--GCGUGGACACCUU-------------GCCUGUGGUGAAAGCGU--UAAACC-CAAUCAGGA-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUAACCGGC-------GAAUGUAAU----GACUGGACUAAGCA-UGUAG----------------------UGCCGACGGCGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_inmed Yersi_molla GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGA-G-GCCUCGUAAAA-----------AACCGCA--AAAAAAAUAAUUGCAAACGACUCGCAA------------------------------------------------UACGAAUCUGCUGCUUUAGCAGCUUAA-------------UCAGCCUAAGAAACUGAAGAUUC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGAUC--GCGUGGACACCUU-------------GCCUGGGGUGAAAGCGU--UAAACC-CAAUCAGGA-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUAACCGGC-------GAAUGUAAU----GACUGGACUAAGCA-UGUAG----------------------UGCCGACGGCGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_molla Yersi_berco GGGGCUG----AUUCUGGA--UUCGACGGGAUUUGC-----GAAACCC-AAGGUGCAUGC--CGAGG--UGCGGA-G-GCCUCGUAAAA-----------AACCGCA--AAAAAAAUAAUUGCAAACGACUCGCAA------------------------------------------------UACGAAUCUGCUGCUUUAGCAGCUUAA-------------UCAGCCUAAGAAACUGAAGAUUC------------------------CCUCUCUCCCUAGCCUCC---------------GCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCUAAAAGAGAUC--GCGUGGACACCUU-------------GCCUGGGGUGAAAGCGU--UAAACC-CAAUCAGGA-UA-------GUUUGUUAGUGGCGUGUCCGUCCGCAGCUAACCGGC-------GAAUGUAAU----GACUGGACUAAGCA-UGUAG----------------------UGCCGACGGCGU------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Yersi_berco Uncul_weevi GGGGCUG----AUCCUGGA--UUCGACGGGAUUUGU-----GAAACUC-AAGGUGCAUGC--CGAGG--UGAGGUUG-GCCUCGUAAAA-----------AAGCCUCAAAAAAAAAUAAUUGCAAACGACUCGCAA------------------------------------------------UACGAAUCUGCUGUGUUAGCAGCUUAA-------------UCAGCCUAAUAAACUGAAGAUUC------------------------CCUCUCUCCCUAGCCUCC---------------UCUCUUAGGACGGGGA--UCAAGAGAGG--------------------------------------------------UCAAACCCAAAANNNNNN--NNNNNNNNNNNNN-------------NNNNNNNNNNNNNNNNN--NNNNNN-NNNNNNNNN-NN-------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-------NNNNNNNNN----NNNNNNNNNNNNNN-NNNNN----------------------NNNNNNNNNNNN------NNNNNNNNNNNNN-NNNNNNNNNNNNNNNNN-NNNNNNNNNNN Uncul_weevi Pasteurellales Mannh_haemo GGGGCUG----AUUUUGGA--UUCGACGGGAUUGGC-----GAAGCCC-AAGGUGCAUGU--CGAGG--UGCGGUAG-GCCUCGUAAAC----------AAACCGCA---AAAUAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUUUAAAGC-----------------------CUUAUCUCCUCAGCUUCC---------------GCUCGUAAGACGAGGG--CAAAGAUAAG--------------------------------------------------UCAC-CCAAAACGAGAUC--GUGUGGACGCCGCC-----------GCUUUAGGAUCGAAACAC--UAAA-UUAAAUAAAGC-UA-------GUUUAUUCAUUGCGUGUCUGUCCGCUGUGAAUAAGC-------GAAAUUAAA----GACUAGACUAAACA-UGUAG----------------------UACUGAAGGUAG------AGAAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Mannh_haemo Mannh_succi GGGGCUG----AUUCUGGA--UUCGACGGGAUUGGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCUCCCUAGCUUCC---------------GCUCGUAAGACGGGGA--UCAAGCGGAG--------------------------------------------------UCAAACCUAAACGAGAUC--GUGUGGACGCUUCG-----------GCUUGGAGAUCGAAACAC--UAAA-UUGAAUCAAGC-UA-------GUUUAUUCUUCGCGUGUCUGUCCGCAGGGGGUAAAU-------GAAAUUAAA----GACUAGACUAAACG-UGUAG----------------------UGCUGAAGGUAG------AGUAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Mannh_succi Haemp_ducre GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGUCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCGCCCUAGCUUUC---------------GCUCGUAAGACGGGGA--GCACGCGGAG--------------------------------------------------UCAAACCAAAACGAGAUC--GUGUGGACGCUUCG-----------GCUUGUAGAUCGAAACAC--CAAA-UUGAAUCAAGC-UA-------GUUUAUUUCUUGCGUGUCUGUCCGCUGGAGAUAAGC-------GAAAUUAAA----GACCAGACUAAACG-UGUAG----------------------UACUGAAGAUAG------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Haemp_ducre Haemp_ducr2 NNNNNNN----NNNNNNNN--NNNNACGGGAUUAGC-----GAAGUCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAA-C----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCGCCCUAGCUUUC---------------GCUCGUAAGACGGGGA--GCACGCGGAG--------------------------------------------------UCAAACCAAAACGAGAUC--GUGUGGACGCUUCC-----------GCUUGUAGAU-GAAACAC--UAAA-UUGAAUCAAGC-UA-------GUUUAUUUCUUGCGUGUCUGUCCGCUGGAGAUAAGC-------GAAAUUAAA----GACCAGACUAAACG-UGUAG----------------------UACUGAAGAUAG------AGUAAUUUCGGAC-CCGGGUUCGACUCNNNN-NNNNNNNNNNN Haemp_ducr2 Haemp_infl1 GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCGCUCCAGCUUCC---------------GCUCGUAAGACGGGGA--UAACGCGGAG--------------------------------------------------UCAAACCAAAACGAGAUC--GUGUGGAAGCCACC-----------GUUUGAGGAUCGAAGCAC--UAAA-UUGAAUCAAAC-UA-------GCUUAAGUUUAGCGUGUCUGUCCGCA-UGCUUAAGU-------GAAAUUAAA----GACGAGACUAAACG-UGUAG----------------------UACUGAAGGUAG------AGUAAUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Haemp_infl1 Haemp_infl2 GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCGCUCCAGCUUCC---------------GCUCGUAAGACGGGGA--UAACGCGGAG--------------------------------------------------UCAAACCAAAACGAGAUC--GUGUGGAAGCCACC-----------GUUUGAGGAUCGAAGCAC--UAAA-UUAAAUCAAAC-UA-------GCUUAAGUUUAGCGUGUCUGUCCGCA-UGCUUAAGU-------GAAAUUAAA----GACGAGACUAAACG-UGUAG----------------------UACUGAAGGUAG------AGUAAUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Haemp_infl2 Haemp_infl3 GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----AAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCGCUCCAGCUUCC---------------GCUCGUAAGACGGGGA--UAACGCGGAG--------------------------------------------------UCAAACCAAAACGAGAUC--GUGUGGAAGCCACC-----------GUUUGAGGAUCGAAGCAC--UAAA-UUGAAUCAAAC-UA-------GCUUAAGUUUAGCGUGUCUGUCCGCA-UGCUUAAGU-------GAAAUUAAA----GACGAGACUAAACG-UGUAG----------------------UACUGAAGGUAG------AGUAAUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Haemp_infl3 Haemp_infl4 GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCGCUCCAGCUUCC---------------GCUCGUAAGACGGGGA--UAACGCGGAG--------------------------------------------------UCAAACCAAAACGAGAUC--GUGUGGAAGCCACC-----------GUUUGAGGAUCGAAGCAC--UAAA-UUGAAUCAAAC-UA-------GCUUAAGUUUAGCGUGUCUGUCCGCA-UGCUUAAGU-------GAAAUUAAA----GACGAGACUAAACG-UGUAG----------------------UGCUGAAGGUAG------AGUAAUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Haemp_infl4 Haemp_somnu GGGGCUG----AUUUUGGA--UUCGACGGAAUUAGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAACAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCAUAGC------------------------CUUCACUCCCUAGCUUUC---------------GCUCGUAAGACGGGGA--UAAAGUGGAG--------------------------------------------------UCAAAUCCAAACGAGAUC--GUGUUGAAGCCGCC-----------GCUUUAGGAUCGAAGCAU--UAAA-UUGAAUAAAGC-UA-------GUUUUUUGAUGGCGUGUCUGUCCGCAGUCAAUUUAC-------GAAAUUAAA----GAUUAGACUAAACG-UGUAG----------------------GACUGAAGGUAG------AGUAAUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Haemp_somnu Pasta_multo GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCAUAGC------------------------CUUCUCUCCCCAGCUUCC---------------GCUCGUAAGACGGGGA--UCAAGAGGAG--------------------------------------------------UCAAAUUCAAACGAGAUC--GCGUGGACGCCUCC-----------GCUUGAGGAUCGAAGCGU--UAAA-UUGAAUCAAGC-UA-------GUUUAUCUAUCGCGUGUCUGUCCGCAGUGGGUAAAU-------GAAAUUAAA----GACGAGACUAAACG-UGUAG----------------------UACUGAAGGUAG------AGUAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Pasta_multo Actbl_actin GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGCCC-GAAGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCCUUUAGC------------------------CUUCGCUCCCCAGCUUCC---------------GCUCGUAAGACGGGGA--UAAAGCGGAG--------------------------------------------------UCAAACCAAAACGAGCUC--GUGUGGAAGCCACC-----------GUUUGAGGAUCGAAGCAU--UAAA-UUAAAUCAAAC-UA-------GCUUAAUUGUCGCGUGUCCGUCCGCA-GGAUUAAGU-------GAAUUUAAA----GACCGGACUAAACG-UGUAG----------------------UGCUAACGGCAG------AGGAAUUUCGGAC-GGGGGUUCAACUCCCCC-CAGCUCCACCA Actbl_actin Actbl_succi GGGGCUG----AUUCUGGA--UUCGACGGGAUUGGC-----GAAGCCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAU----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCAUUUAGC------------------------CUUCGCUCCCCAGCUUCC---------------GCUCGUAAGACGGGGA--UCAAGCGGAG--------------------------------------------------UCAAACCUAAACGAGAUC--GUGUGGACGCUUCG-----------GCUUGGAGAUCGAAACAC--UAAA-UUGAAUCAAGC-UA-------GUUUAUUCUUCGCGUGUCUGUCCGCAGGGGAUAAAU-------GAAGUUAAA----GACCAGACUAAACG-UGUAG----------------------UGCUGAAGGUAG------AGUAAUUUCGGAC-GCGGGUUCAACUCCCGC-CAGCUCCACCA Actbl_succi Actbl_pleu1 GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGUCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCAUAGC------------------------CUUAUCGCCUCAGCUUCC---------------GCUCGUAAGACGAGGG--CAACGAUAAG--------------------------------------------------UCAC-CCAAAACGAGAUC--GUGUGGACGCCGCC-----------GUUUGAGGAUCGAAACAC--UAAA-UUGAAUCAAAC-UA-------GCUUAUUUCUUGCGUGUCUGUCCGCUGGAGGUAAGU-------GAAAUUAAA----GACCAGACUAAACG-UGUAG----------------------UGCUGAAGAUGG------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Actbl_pleu1 Actbl_pleu2 GGGGCUG----AUUCUGGA--UUCGACGGGAUUAGC-----GAAGUCC-AAGGUGCACGU--CGAGG--UGCGGUAG-GCCUCGUAAAC----------AAACCGCA---AAAAAAUAGUCGCAAACGACGAACAA---------------------------------------------------------UACGCUUUAGCAGCUUAA---------------------UAACCUGCUCAUAGC------------------------CUUAUCGCCUCAGCUUCC---------------GCUCGUAAGACGAGGG--CAACGAUAAG--------------------------------------------------UCAC-CCAAAACGAGAUC--GUGGGGACGCCGCC-----------GUUUGAGGAUCGAAACAC--UAAA-UUGAAUCAAAC-UA-------GCUUAUUUCUUGCGUGUCUGUCCGCUGGAGGUAAGU-------GAAAUUAAA----GACCAGACUAAACG-UGUAG----------------------UGCUGAAGAUGG------AGUAAUUUCGGAC-GGGGGUUCAAAUCCCCC-CAGCUCCACCA Actbl_pleu2